Gene Francci3_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3842 
Symbol 
ID3905590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4602665 
End bp4603312 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID637881168 
Productserine O-acetyltransferase 
Protein accessionYP_482921 
Protein GI86742521 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.102983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAATG TTGTTCTTCG GGACATTGAC CGATTTGTCT ACTACGACAA CGATGGCCGT 
CGACCCCGCT CGATCGGGGC CAGTCGCATC GCTGCTGTTC TGAACAACCC CGGCCTCCAG
GCGATCCTCG TCTACCGGTT CGGTGCGTTC GTCGCAAGTC CGCAGAAAGG CGTAGCCGGG
GCGGCAGGGC GGCTCTTGGG CACGGTTGTC TACCGCGTTC TGTCTCGGGT TTCGCAGATC
GTGACGGGTA TCTGGATCTC CCCCGCCGCC AGGATAGGTC CGGGATTTTT TATCGCCCAT
TTTGGGGGTG TGATCATTGG TGCCTGTGAA ATTGGTGAGA ACTGCAACGT AGGACACGAT
GTGACGATAG GAAAGAGTGG TACTGGCGAG AAGTTCGGTC GCCCGACAAT CGGCGATCGG
GTGAGTATCG GGACTGGAGC GAGGATCCTG GGTCGTCTTG AGGTGGGAGA CGACGCCCTG
GTGGGCGCCA ATGCCGTGGT AACCCGATCG CTTGCTGCTC GATCGGTCGC GGTGGGTGCT
CCTGCCCGCG TGGTCTCGAG CCGGGGCGCC TTCGAGTATG TCGAGTACTT CGGGATGGTG
CGGGACGAGG CCAGAAGGGC GTCGCTCGGC CTGGTCAGCT CGCCATAG
 
Protein sequence
MKNVVLRDID RFVYYDNDGR RPRSIGASRI AAVLNNPGLQ AILVYRFGAF VASPQKGVAG 
AAGRLLGTVV YRVLSRVSQI VTGIWISPAA RIGPGFFIAH FGGVIIGACE IGENCNVGHD
VTIGKSGTGE KFGRPTIGDR VSIGTGARIL GRLEVGDDAL VGANAVVTRS LAARSVAVGA
PARVVSSRGA FEYVEYFGMV RDEARRASLG LVSSP