| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3822 |
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| Symbol | |
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| ID | 3905570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4582347 |
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| End bp | 4583429 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637881148 |
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| Product | hypothetical protein |
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| Protein accession | YP_482901 |
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| Protein GI | 86742501 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0763012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0331806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACGC ATCCCCGGCT CCGCATCCCC GGCTCCGCAT CCCCGGCTCC GCATCCCCGG
CCGCTGGGGG ACCTGCCGCA CCCGCCCGTA AGCTCGCTCA CCATGACGGA CGCCGCTGCC
CCCCGCACAC CCTCCCGGGG AAGCCTCGGT GCGGTGGCGC CGCAGCCGCT GCGGGTCGAA
CCCGCCGAGG TCGACCGCAA CCGGCTGGCC GTGATCGTCA ACCCGAGCGC GGGTCACGGG
CGGGCGATGC GGATGCTCGA CGGCGTCCGC GTCGAGCTCG CGCGCTGGGC GCGGGACGTC
CGGGTCACCC CGACCCGCGA CCTCGCCCAC GCGGACGATC TCGCGGCGGC GGCCACCGCC
CAGGGCCGGG TCGTGGTCGC GCTCGGGGGC GACGGCCTAG CTGGCTCGGT GGCAGGGGGG
GTGGCCCGCT GCGGCGGCGT GCTCGCGGTG CTCCCCGGCG GGCGCGGTAA CGACTTCGTG
CGTGGTCTCG GCCTGCCCCG CGACCCGTGC CGCGTCGCGG CCGGGCTTGC GCACGCCCGG
GAACGCCGGG TCGACCTGCC CGAGGTCGGC GGCCGGCCGT TTCTCGGGAT CGCGAGCGTT
GGCTACGACT CCGACGTCCA GGTGATCGCC AACCGGACCC GGTTCCTGCG CGGCCAGCAG
GTCTACACCT ACGCGGCGCT GCGGGCGCTG GCCGCCTGGC GCCCGGCGCG CTTCACGGTG
ACGGTGGACG ACCTCGCGCC TCGGGACCTG GTCGGGTGGA CGGTTGCGGC GGCGAACTCG
GCGTACTACG GCGGCGGGAT GCGGTTCGCC CCCGGGGCGG ACATCGCCGA CGGGCTGCTG
GACGTCCTGC TGATCTCGCG CACCTCCCGC CTGACGTTCC TGGCGCTGTT CCCGCGGGTG
TTCTCCGGGC GTCACGTCGA CACCCGGCAC GTGCGGGTGC TGCGGGCCCG GCGGGTGCGC
ATCGAGGCCG ACCGGCCCTT CGCCGTCTAC GCCGACGGCG ATCCGCTGGC GTCGTTGCCG
GCGGAGATCG TCGTGCGCCC CGGTGCCCTG CGGCTGCTCG TGCCGGTTAT TCCGGCGTCC
TGA
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| Protein sequence | MVTHPRLRIP GSASPAPHPR PLGDLPHPPV SSLTMTDAAA PRTPSRGSLG AVAPQPLRVE
PAEVDRNRLA VIVNPSAGHG RAMRMLDGVR VELARWARDV RVTPTRDLAH ADDLAAAATA
QGRVVVALGG DGLAGSVAGG VARCGGVLAV LPGGRGNDFV RGLGLPRDPC RVAAGLAHAR
ERRVDLPEVG GRPFLGIASV GYDSDVQVIA NRTRFLRGQQ VYTYAALRAL AAWRPARFTV
TVDDLAPRDL VGWTVAAANS AYYGGGMRFA PGADIADGLL DVLLISRTSR LTFLALFPRV
FSGRHVDTRH VRVLRARRVR IEADRPFAVY ADGDPLASLP AEIVVRPGAL RLLVPVIPAS
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