Gene Francci3_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3794 
Symbol 
ID3906079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4546276 
End bp4547439 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content75% 
IMG OID637881120 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_482873 
Protein GI86742473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTCAG CACCTTCAGA ACAGGCGTGG AGCACCGTCG ATGCCGCGCT GCGGGCCGCC 
AGTGCCCTTC ACCGGATGGA GACGGCCTGT TTCGTCGTGG TATCGACGAC GACCGCGAGC
TATCTCCGGG TAACAGGTCC CTCCCCTGGT CTCGACGAGG GAACGCACTA TCCCCGGGGG
GACAGCCTGG TCGCCCGCGT GCTCGACGGC ACGCCCGCCA CGGCGTCCGG TCTTGACCCG
ACGCACGCCG GATCCGACAC GGCCGAATAC CGCCAGCTCG GGATACGCAG CCATGTCACG
ATGCCGGTGG TCCGCACGGA CGGTCGGCTG GTGGGCCTCC TCGTCGGCCT GGACCGTAGC
AAGGTGATCG TATCGGCCGA CATCCTGGCC CTGCTGCGCG GGGTAGCCGA TGCACTCGCG
GTCACCGGGG ACGTTCCCGC GCCGAGCCCG CCGACGGTCT CCGCGAACGG TCCCCGCCCG
CCCGGCGGCC CGCCCCCGCC GGGCCCACCG GCGACCCCGC GCCCACCGGG GCGGATACCC
ACCCCGCAGA CCATCGCGCG GGCGGCCCGG CCCGGACCGC CGGGCCGGGC CGGGCCGGAC
CGGCCCGGAC CGCCGTCCGC GGCGGGCGGA ACCGGGGCGG GAACCGGCCC CCGCCGGACC
CCCTCGGACA TGCGCCTTCG ACGTACTCCC GCCGGGTGGG TCGTGGAGGG CCCCGGAGCC
GAGATCCGGC CGGTCGGCGA CCTCCTCTCG GCAATGGTGC TCGCCGATCT GCTGGCCGAG
GATCTCGCCC CGCCCGGCCG ACCCCGCCGC CCCGATCGTG ACCTGAGCGA GGTCGAGCAG
CTCCGGCTGT CCGTCGTCCA GCTGGAACAC GCGCTGGCCT CCCGCGTAAT CGTGGAACAG
GCCATCGGGG TCCTCGCCGA ACGTAACCAC ATCCGCCCGC GGGAGGCCTT CGAGCGGCTG
CGGCGCACCG CTCGCGGAAT GGGACGCAGG GTGCACGATC TGGCTCGGCA GGTGGTCGAT
TCGGTTGGCG ACCCACGCGC CGTGCTACCG GGCGAGCTCG GTGGGCGGGG CGGCAATCCA
CCGGGCGGTG GACCACCGGC ACCGGGCCCC GGCGGCGGCG CGCCCCGCCC CGCGCCCCCG
CGTCCCACCT CCACCAGGCG CTGA
 
Protein sequence
MSSAPSEQAW STVDAALRAA SALHRMETAC FVVVSTTTAS YLRVTGPSPG LDEGTHYPRG 
DSLVARVLDG TPATASGLDP THAGSDTAEY RQLGIRSHVT MPVVRTDGRL VGLLVGLDRS
KVIVSADILA LLRGVADALA VTGDVPAPSP PTVSANGPRP PGGPPPPGPP ATPRPPGRIP
TPQTIARAAR PGPPGRAGPD RPGPPSAAGG TGAGTGPRRT PSDMRLRRTP AGWVVEGPGA
EIRPVGDLLS AMVLADLLAE DLAPPGRPRR PDRDLSEVEQ LRLSVVQLEH ALASRVIVEQ
AIGVLAERNH IRPREAFERL RRTARGMGRR VHDLARQVVD SVGDPRAVLP GELGGRGGNP
PGGGPPAPGP GGGAPRPAPP RPTSTRR