| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3783 |
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| Symbol | |
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| ID | 3906068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4534083 |
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| End bp | 4535120 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881110 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_482863 |
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| Protein GI | 86742463 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.331008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.173325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGGC GCACCCAGAC CCTCGTGGTC GCGTCGGTAC TGGCCTTGGT TCTCGTGGTC
GCGGGGCTGT GGATGCCGGT ACCGTTCGTC ACCTTGGCCC CCGGGCCGGT CACCGACACC
CTCGGCAGCG TTGACGGGAC GTCCTTGATC ACCGTGGACG GCCGGCGGAC CTATCCGACC
GCCGGCAAGC TCGAACTGAC CACGGTCGAG GAGACGCCCC GGCTCAACCT CGTCACCGCG
CTGCGGGACT GGTCCGACTC CGACCGGGCG GTGGTCCCCA GCGAGCTGAT CAGGCCGCCC
GGTTCGAGCC AGGAGCAGAT CCAGCAGGAG AACGCGCAGG CGATGCTCGA CTCACAGGAC
CAGGCGACCG CGGCAGCGCT CGCGCAGCTC GGTATCGCGC CCACCGGCCG TTCGGTCGCG
GTCGCCGGGG TCCCCACGGG CTCCCCGGCC ACCGGCAAGC TGATGCCGGG CGATGTGATC
GTGCAGGTCG GTGGGATGGC CGTGGCCAAC CAGGAGGAGC TGCGCCGGCA GATCGGGAAG
GTGGCTCCGG GCCATCCTGT GACGGTCACC TATCGGCGCG ACGGAAAGAC GGCCACGGCC
ACCGTCACGA CCCGGGCCGC CACCGACGAC CCCGCTCGTG CCATGATCGG TGTCACCACG
ACGGAGAAGC GGACCTACCC GTTCACGGTT CGTATCCGCA TCTCCGATGT CGGCGGGCCG
AGTGCCGGGC TGATGTTCGC GATGGGCATC GTGGACCTTC TCACCCCCGG CGCGTTGACC
GGAGGAAAGA TCATTGCTGG CACCGGGACG ATCACCTCCG CCGGTGAGGT GGGACCGATC
GGCGGTATCC AGCAGAAGAT CCTCGGGGCC AGGGCGTCCG GGGCATCGAT CTTCCTGGTC
CCCGCGGGGA ACTGCGGTGA CGCCCGCGCG ATCGGCTCCG GCGGTCCGCG CCTGGTGAAG
GTGGAATCGC TGGCGGGCGC GCTGAAGGCC GTCGACGCCC TCCGGACGAA TCCGGCCGCG
GCGGTGCCCT CCTGCTGA
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| Protein sequence | MVRRTQTLVV ASVLALVLVV AGLWMPVPFV TLAPGPVTDT LGSVDGTSLI TVDGRRTYPT
AGKLELTTVE ETPRLNLVTA LRDWSDSDRA VVPSELIRPP GSSQEQIQQE NAQAMLDSQD
QATAAALAQL GIAPTGRSVA VAGVPTGSPA TGKLMPGDVI VQVGGMAVAN QEELRRQIGK
VAPGHPVTVT YRRDGKTATA TVTTRAATDD PARAMIGVTT TEKRTYPFTV RIRISDVGGP
SAGLMFAMGI VDLLTPGALT GGKIIAGTGT ITSAGEVGPI GGIQQKILGA RASGASIFLV
PAGNCGDARA IGSGGPRLVK VESLAGALKA VDALRTNPAA AVPSC
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