Gene Francci3_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3729 
Symbol 
ID3903831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4464250 
End bp4465068 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content70% 
IMG OID637881056 
Producthypothetical protein 
Protein accessionYP_482810 
Protein GI86742410 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.844109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.476459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGACG CGACGGAGTT GAACCGGGCG CGCTGGGATG AGCTGGCGCG CCTGCACGGG 
CAGGACGACT ACTACGACGT CGAGGGTTTT CTCGCCGGGC AGATCATGCT GAGTGGGCGG
GAGCGGGAGG AGATGGTCGC GGCCGTCGGG TCCGTCTCGG GCCTCGATCT CCTACATGTG
CAGTGCCATT TCGGGTTGGG GACGCTGTCG TGGGCCCGGC TCGGCGCGCA GGTCACCGGC
CTGGACTTCT CCCCCGTCGC GGTGGAACGA GCCCGCTCGC TGGCCACCGC GGCGGGAATC
GACGCGCGGT TCGTCCAGGC GGACGCCCAG CGGCTGCCGG CGGACCTGGC CGGCGCGTTC
GACGTCGTGT TCGCCTCCTA CGGTGTGCTG CCCTGGATCG CCGACGTGAC GGCGTGGATG
ACCGCGGCGG CCACGGCGCT GCGTCCCGGC GGCGTCCTGG TGCTGGTGGA CGGGCACCCG
CTCACCCAGA TGATCGACAC CGTCGACCCT GTCAGGTTCG GTTTTCCGTA CCAGGGCAGC
ACCGCTCACC ACATCCGATC CGCCAGCTTC TACGCGGGCA GTGCCACCCA GCTGACGACC
ACGGAGACCG TGCAGTATCC CCACGGCCTG GGCGAGATCG TGACCGCGGC GGCTACCGCT
GGACTGCACG TGGACGCGCT TACCGAATAC CTCGACTCCG ACGGCCCGGA AGGACGCTCA
GACCAGATGA GGTGCGGGCA GGACGGCCGC TGGCGGCTGA TCCTCACCGG CCAGCCCGTC
CCGGTGCAAT ACGCACTGCG TGCCACACAG AACTCCTAG
 
Protein sequence
MDDATELNRA RWDELARLHG QDDYYDVEGF LAGQIMLSGR EREEMVAAVG SVSGLDLLHV 
QCHFGLGTLS WARLGAQVTG LDFSPVAVER ARSLATAAGI DARFVQADAQ RLPADLAGAF
DVVFASYGVL PWIADVTAWM TAAATALRPG GVLVLVDGHP LTQMIDTVDP VRFGFPYQGS
TAHHIRSASF YAGSATQLTT TETVQYPHGL GEIVTAAATA GLHVDALTEY LDSDGPEGRS
DQMRCGQDGR WRLILTGQPV PVQYALRATQ NS