| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3723 |
|---|
| Symbol | |
|---|
| ID | 3903824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4457247 |
|---|
| End bp | 4458416 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637881049 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_482804 |
|---|
| Protein GI | 86742404 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0083] Homoserine kinase |
|---|
| TIGRFAM ID | [TIGR00191] homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.422816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.66686 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACTC GGTCCTCCCC GCGCCCAGGC GGGACGGCGG CCTTCGCCGA GCGGGTCGGC
CGGTCCGGGC CGGTCACCGC CGCCGACGGC GTGTCGCGGC GGGTCCGGGT CCGGGTGCCG
GCGACCAGCG CGAATCTCGG CCCCGGCTTT GACACGTTCG GCCTGGCATT GGGCCTGTAC
GACGAGGTCG ATGTCGAGAC GACCCGATCC GGTCTCACCG TTGACGTCGT CGGCACGGAC
GTCGTCGCCC GGGACGAGAC GCACCTCGTG GTCCGGGCGA TCCGGGCGAC CTTCGACACC
CTCGGCCGGG CGCAGCCCGG TCTCGCGTTG CACTGCGTCA ACCGGATCCC GCACGGCCGC
GGGCTGGGAT CATCGGCCGC GGCGATCGTC GCCGGGGTCG TCGCCGCCGC CGCGCTCGCG
CAGCCGGACC TCGGGCCCGC CTTCGAGACC GATGCCGCCT TTGACGCCGA TGCCGCCTTT
GACGCCGATA CCGCCTTTGA CGCCGGCGCG GACTCCGTGT CCGCGTCCGA TGACGCACCC
GAGCCGGACC CGGTGTCCAG AGCGGCGTCC GGAGCCGGCT TCTTCGGGCC CGCGGGCATG
CTGCGGCTCG CCAGCGCCAT CGAGGGGCAC CCGGACAACG TCGCCGCGGC GCTGAGCGGG
GGCTTCACCG TTGCGTGGCA GGACGGCGAC GGTGCCCGGT CCCTGCGCGT CGATCCCTTC
GCCGAGCTGA GACCCGTGAT CTTCATCCCC GCGATACGGC AGTCGACCGA GCAGTCGCGC
GGGGCGCTGC CGAGCGGCGT TCCGTTCGCC GACGCCGCCC GCAACCTCGG TCGGGCCGCG
CTGCTGGCGT TGACGATGTC GGCCGCCGAG CCGGCCGCCG GGCAGCCGTC CCGACGTGCC
GAGGCACTCC TGCGTGCCAC CGAGGATCTG GTGCATCAGC CCTACCGGTT CCCCGGCGTC
CCGGCGTCGG CGGACCTCGT CGGTCGGCTG CGCGGCGGGG GGATCGCGGC GGCCCTGTCC
GGTTCGGGGC CATCCGTCAT CGCCCTCGCC GTCGGTGGTG AACAGGCCGC GGCGGCGGTG
GACGTGGCGG GTGCCGGGTT CTCCGTCGCC CCGCTGCCGG TGGACAGACA CGGTGCACGC
GTCACCCGAT GTCGATCCGC AGCGCCATGA
|
|---|
| Protein sequence | MTTRSSPRPG GTAAFAERVG RSGPVTAADG VSRRVRVRVP ATSANLGPGF DTFGLALGLY
DEVDVETTRS GLTVDVVGTD VVARDETHLV VRAIRATFDT LGRAQPGLAL HCVNRIPHGR
GLGSSAAAIV AGVVAAAALA QPDLGPAFET DAAFDADAAF DADTAFDAGA DSVSASDDAP
EPDPVSRAAS GAGFFGPAGM LRLASAIEGH PDNVAAALSG GFTVAWQDGD GARSLRVDPF
AELRPVIFIP AIRQSTEQSR GALPSGVPFA DAARNLGRAA LLALTMSAAE PAAGQPSRRA
EALLRATEDL VHQPYRFPGV PASADLVGRL RGGGIAAALS GSGPSVIALA VGGEQAAAAV
DVAGAGFSVA PLPVDRHGAR VTRCRSAAP
|
|---|
| |