| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3693 |
|---|
| Symbol | |
|---|
| ID | 3903794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4428630 |
|---|
| End bp | 4429265 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637881019 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482774 |
|---|
| Protein GI | 86742374 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3339] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGTGC TCGACAGGGA CGCCGTGCGA GCGTTCAGTC GGGAAGTCAC GATGTTCCTT
CCCGATCTGG TCCAGCTGCT GCGGCGGGTC GTCGCCGATC CGCGGGTCCC GCAGTCCGCG
AAGGTGGAGG CCGCCGCGGC GCTCGCGTAC CTCGTGTCGC CGAAGAACCG GCTGACCAAC
GCGATTCCGG TGGTGGGTCA GCTCGACGAC GTCGCGGTCA TCGCGTTCGC CTTCCGGCGG
CTGGCCGTCG GAGCCGGGGA GCCGATCCTG CGTGAGCACT GGCGTGGCAG CGATCGCGGC
TTCCAGCTGC TCATCGGTGC GTCGTCCGCC CTGGCGAGTC CGGCGGGGGC CGTGCGCAAG
GCCAAGCTCG CCCGCTCGCT CGTGATGGCC GGCTTCGAGC GGGTCGGCGG GCGGGTGCGG
TGGACGGGCG AGAGGTTCGG GGCGGGGACG GGCGGGCGCA CGACGGCCTC CTCGGCCGGA
CCGGCGGCGG ATGACCGGCC TCGGATCGTT GACGGCGAGG TGGTGGACCG GGGCGAGTGG
GTCGCGGGCC CGCCGGCCGG CGATACCCCG GGTTCGGGTT CCCGCACCCG GCGGGATCGG
TTCCGGGCAT CGGGCAGACC CGCTCGCGGG CGGTGA
|
|---|
| Protein sequence | MVVLDRDAVR AFSREVTMFL PDLVQLLRRV VADPRVPQSA KVEAAAALAY LVSPKNRLTN
AIPVVGQLDD VAVIAFAFRR LAVGAGEPIL REHWRGSDRG FQLLIGASSA LASPAGAVRK
AKLARSLVMA GFERVGGRVR WTGERFGAGT GGRTTASSAG PAADDRPRIV DGEVVDRGEW
VAGPPAGDTP GSGSRTRRDR FRASGRPARG R
|
|---|
| |