| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3680 |
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| Symbol | |
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| ID | 3905364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4414980 |
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| End bp | 4416350 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881006 |
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| Product | putative pep2 protein |
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| Protein accession | YP_482761 |
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| Protein GI | 86742361 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACC ACCACGCGGA ACTGACCGGC CTGTTGCGCG AGTGGCTCCC CCGGCAGCGC
TGGTTCGCCG GGAAGGGCAG ATCCGGGGGC GGCCTGCGGA TCCGTCACGA CGTCATGGTC
TTCGAACCGC TACGGCTGCT CGTCGTTGAC GTCGACTACG ACCACGGTCC GTCGGACCAT
TACCAGGTTC CGGTGGTCAT CCGCTCGGAC GCGCCCTTCG GCCACGAGGG CTTCCTGATC
GGCGAGAGTG CCGGCGGCCT GGTCTACGAC GGCCTGCACG ACCCCGATGG CAGCTCGGCC
CTGCTGAGTT TCCTCCGCCG GTCGACACAC CGCGACGGCC TCGTCGCCGA GGCGCTGGAA
CCACTGGACA TCCTGCCCGC CCACGCCGTC GGCGCCGAGC AGTCCAACAC CTCGATCGTC
TACGGCGACG CCTACATCCT CAAGGTGTTC CGGCGGCTCT GGCCGGGCGT CAACCCCGAT
CTGGAGGTGA CCCGGGCGCT GGCGGAGGCG GGCAGCACAC ACGTGGCCCG CCCCGTCGCC
TGGTACTCCG GCCGTGTCGA CGGGACACCG ACCACCTTCG GATTCCTCCA GGAGTACCTG
CGCAGCGGTA CCGAGGGCTG GCGACTGGCG CTGGCCAGCG TGCGCGACCT GTACGCCGAG
GCCGACCTGC ACGCCGACGA GGTCGGCGGC GACTTCGCCG CGGAGGCCGA GCGGCTGGGT
ACCGCCACCG CCGAGGTGCA CGCCGACCTC GCCCGGACGC TGCCGACGAG GCCCGCGACC
GCCGATGCCC TGCGCTCCCT GGTGACCTAC CTGCATGGCC GGCTGGATGC GGCGGTCGAG
GCCGTCGCCG AGCTGCGTCC CTTCGAGGCG GCGATCCGCA AGAGCTACGA CGAGGTGACG
GGGGCGTCGG CGCAGGCCGT CCATCCCCGG CCCTTCCAAC GGCTACACGG CGATCTGCAC
CTGGGTCAGG TCCTGCGGGT CGACTCGGGC TGGGTGCTGT TCGACTTCGA GGGGGAGCCA
GTCCGCCCGG TCGCCGACCG TGTGGGGCTG GAATCGCCGC TGCGCGACGT CGCCGGGATG
CTGCGCTCGT TCGACTACGC GGCCCGGTCG ATGCTGCTCG AACGCGGTGA CGAGCCGTCG
TTGGCCTACC GCGCCCAGGA GTGGGCAGAT CGCAACCGGG AGGCGTTCTG CCGGGGCTAC
GGTGCCGCGG CCGGCCGCGA TCCTCGTGCG GATGCCGTGG TGCTGCGTGC GTTCGAGCTC
GACAAGGCCG TGTACGAGAT CCTGTACGAG GCCCGCCACC GACCGGGGTG GATCGGGATC
CCGCTGTCCT CGGTGGAACG ACTGACCCGG TCCAGCCCGT CGGCGGGGTA A
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| Protein sequence | MGDHHAELTG LLREWLPRQR WFAGKGRSGG GLRIRHDVMV FEPLRLLVVD VDYDHGPSDH
YQVPVVIRSD APFGHEGFLI GESAGGLVYD GLHDPDGSSA LLSFLRRSTH RDGLVAEALE
PLDILPAHAV GAEQSNTSIV YGDAYILKVF RRLWPGVNPD LEVTRALAEA GSTHVARPVA
WYSGRVDGTP TTFGFLQEYL RSGTEGWRLA LASVRDLYAE ADLHADEVGG DFAAEAERLG
TATAEVHADL ARTLPTRPAT ADALRSLVTY LHGRLDAAVE AVAELRPFEA AIRKSYDEVT
GASAQAVHPR PFQRLHGDLH LGQVLRVDSG WVLFDFEGEP VRPVADRVGL ESPLRDVAGM
LRSFDYAARS MLLERGDEPS LAYRAQEWAD RNREAFCRGY GAAAGRDPRA DAVVLRAFEL
DKAVYEILYE ARHRPGWIGI PLSSVERLTR SSPSAG
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