| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3594 |
|---|
| Symbol | rpsP |
|---|
| ID | 3904148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4292100 |
|---|
| End bp | 4292546 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637880915 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | YP_482675 |
|---|
| Protein GI | 86742275 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAACCA AGATTAAACT GCAGCGTCTC GGCAAGATGC GCGAGCCGCA CTACCGCATC
GTCGTGGCCG ATGCCCGTAC CAAGCGGGAT GGTCGGGTCA TCGAGTCCAT CGGGCAGTAC
CACCCCAAGT CTGACCCGAG CATCATCAAG GTCGACGCCG AGCGGGTGGG GCACTGGCTC
TCGGTCGGTG CACAGCCCAC CGAGCCCGTC CTCGCGATCC TCAAGGTCAC CGGGGACTGG
CAGAAGTTCA AGAACCTGCC GGCGCCCCCG CCGATGAAGG TCGCCGAGCC AAAGGCGGAC
AAGCGGGAGA TCTTCCAGGC GGCCGCGCGG GCCGCCGCGG GCGCCGAGGA CCGGCCGGCG
ACCACGCCGA AGAAGGCCAA GAAGTCCGGG TCGGCAGAGG AAGCGGAAGC CGCCCCGGCC
ACGGACGCAC CGGCCGCGGG GCAGTAG
|
|---|
| Protein sequence | MATKIKLQRL GKMREPHYRI VVADARTKRD GRVIESIGQY HPKSDPSIIK VDAERVGHWL
SVGAQPTEPV LAILKVTGDW QKFKNLPAPP PMKVAEPKAD KREIFQAAAR AAAGAEDRPA
TTPKKAKKSG SAEEAEAAPA TDAPAAGQ
|
|---|
| |