Gene Francci3_3560 details

Gene Information

• Locus tag: Francci3_3560
• Symbol: rbfA
• ID: 3904499
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Frankia sp. CcI3
• Kingdom: Bacteria
• Replicon accession: NC_007777
• Strand: -
• Start bp: 4257864
• End bp: 4258370
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637880881
• Product: ribosome-binding factor A
• Protein accession: YP_482641
• Protein GI: 86742241
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0858] Ribosome-binding factor A
• TIGRFAM ID: [TIGR00082] ribosome-binding factor A

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0466003
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.834335
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCTGATC CGGCCCGGGC ACGGCGGCTG GCCGTGCGTA TCCGCGAGGT TGTGGCGTCC 
ACGCTGGAGC GTGGCGTCAA GGATCCTCGA CTCGGCATGG TGACCGTCAC GGATGTGCGG 
CTGACGCCGG ATCTGGTCGA CGCGACGGTC TTCTACACCG TCTACGGCGA TGAGACGGCG 
CGGCAGGCGT CGGCCCAGGC GCTCGAATCC GCCCGGGGGC TGCTGCGCAG CCAGGTCGGC 
CGGGCCACGG GGGTGAAGGT GACCCCGACG CTCACCTTCG TTCATGACCG ACTTCCCGAC 
GACGCCCAGC ATCTGGAGAA GTTGATCAGC GTTGCCCGGG AACGCGACGC GTATCTGGCC 
GAGGTCCGTC GGGATGCTCG CCCGGCGGGC GACGACGATC CCTACCGCCG GCCGCGCCCC 
GCCGCCGGCG AGGTGGATGA GCTGAGCGAG GTGGATGAGC TGAGCGAGGT GGACGAGTAC 
GGCGGGACGG CCCGGCAGGA GGGATGA 

 

Protein sequence

MADPARARRL AVRIREVVAS TLERGVKDPR LGMVTVTDVR LTPDLVDATV FYTVYGDETA 
RQASAQALES ARGLLRSQVG RATGVKVTPT LTFVHDRLPD DAQHLEKLIS VARERDAYLA 
EVRRDARPAG DDDPYRRPRP AAGEVDELSE VDELSEVDEY GGTARQEG