Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3559 |
Symbol | |
ID | 3904498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4256678 |
End bp | 4257838 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880880 |
Product | phosphoesterase, RecJ-like |
Protein accession | YP_482640 |
Protein GI | 86742240 |
COG category | [R] General function prediction only |
COG ID | [COG0618] Exopolyphosphatase-related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0624488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.616422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGGCA CGAGACAGCT GCGATGGGAA CTGACGATGA GCGATGCGAC CGATCTCGCG GGCCCGCCGG CGGCGTCGGT CAACCGCTCC CGCCCGGACG GTGCCGGTCC GACCGGTGAT TTCCAGGCCG CGGTGACCGC ACTGACCGGC GCGATCGACG CCGGTGACGA CATCCTGCTG ATCGCCCACG TGAACCCCGA CGGGGACAGT CTCGGATCGG CGTTGGCGCT GGGGCTCGCG CTGCGGTCGC TGGGCGGAAG GCCGCGGGTG TCCTTCGACG CGGATCCCTT CGTCGTTCCC CGGGTGCTTC GTTTCCTCGC CGGTCAGGAT CTGTTGGTGG CCCCCGAGGC CGTCACCGGC CGGCCGGGTC TCGTGGTGAC CCTGGACGCC GGCAGCCGGT CCCGGCTGGG CAGGCTCGCC AGCACCACGG CCGGTTGCCG GGTCCTGGTC GTCGACCACC ATGCCTCCAA CACCCGGTTC GGCGATCTCA ATCTGGTCGA CCCCGAGGCG GCCTCGACCA GCGCCATGGT CATCGACCTC GTCGATGCCC TGGGCGTGCG GCTCGACCGG GACATCGCGA CAGCGATCTA CACCGGTCTG GTAACCGACA CGGGATCGTT CCGTTTCGCC GCGACGACAC CGGCGGTGCA CCAGCTGGCC GCCCGGCTGG TGGCCACGGG CATCCGTCCC GACCTGATCA GCCGTGCCCT GTGGGACACC CACCGCTTCG GCTATCTCAA GCTACTCGGG GAGGTTCTCG GCCGCGTCCG GCTGGAGCCC GAGTACGACC TCGTCTGGTC CTGGTGCAGC CAGGCCGATC TGCGCGCCGC GGGACTGGAG TACGACGAGA TCGAGGGGCT CATCGACACG GTGCGCACCG TGTCGGAGGC AGAGGTCGCC CTTGTCTGCA AGCAGGATGG TGACGTCTGG AAGGTCTCGG TCCGTTCCAA GGGGGACGTT GACGTCGGCG CGGTCTGTAC GGCTCTCGGT GGTGGCGGCC ATCGCTTCGC CGCCGGATTC TCCTGCGGGA CGACGCTCGA CGAGTTGATG GACGTGCTTC GGGACGCGCT GGCGCGGGCT CCGCGCCTGG GGGGCCCGGG GACTCCGGAG AATCCGCGCG GCCCGGGTGG CCCGAGGAAC GCGGTCCGGA GCCCGCGGTG A
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Protein sequence | MTGTRQLRWE LTMSDATDLA GPPAASVNRS RPDGAGPTGD FQAAVTALTG AIDAGDDILL IAHVNPDGDS LGSALALGLA LRSLGGRPRV SFDADPFVVP RVLRFLAGQD LLVAPEAVTG RPGLVVTLDA GSRSRLGRLA STTAGCRVLV VDHHASNTRF GDLNLVDPEA ASTSAMVIDL VDALGVRLDR DIATAIYTGL VTDTGSFRFA ATTPAVHQLA ARLVATGIRP DLISRALWDT HRFGYLKLLG EVLGRVRLEP EYDLVWSWCS QADLRAAGLE YDEIEGLIDT VRTVSEAEVA LVCKQDGDVW KVSVRSKGDV DVGAVCTALG GGGHRFAAGF SCGTTLDELM DVLRDALARA PRLGGPGTPE NPRGPGGPRN AVRSPR
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