Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3509 |
Symbol | |
ID | 3905243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4193550 |
End bp | 4193924 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880831 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_482591 |
Protein GI | 86742191 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.137678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGATCCG CACACAGGGC GCGGGTCGTC GACCTGTCGA TGGCCAGGGA CCGGGTGGGT CATCGGCCGC CGGGTCGCCC GCCCGCACCC CCGCCGCTCC GGCTGACCCG GCGGGGTCGG GTGGTGGTGG TATCGATCGT CGTGGCGGTC GTCGTGGCGG TAGCAATCAT GATCATGCCT GGGGTGTCGA TTGCCGGGCC GGATACCGCG GAGGCGCCGC GGCACCATCT GGTCATGCCG GGGGAGACGC TGTGGGAGGT GGCAGTGGCG CTCGACGAGA GCGCCGACAC CCGGGTCATG GTGGACCGGC TGATGCGGCT GAACCACCTG CGGTCACCAC TGATCGCCCC GGGCCAGTCG TTACTCCTTC CCTGA
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Protein sequence | MGSAHRARVV DLSMARDRVG HRPPGRPPAP PPLRLTRRGR VVVVSIVVAV VVAVAIMIMP GVSIAGPDTA EAPRHHLVMP GETLWEVAVA LDESADTRVM VDRLMRLNHL RSPLIAPGQS LLLP
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