| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3508 |
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| Symbol | nrdR |
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| ID | 3905242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4192675 |
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| End bp | 4193220 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880830 |
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| Product | transcriptional regulator NrdR |
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| Protein accession | YP_482590 |
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| Protein GI | 86742190 |
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| COG category | [K] Transcription |
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| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
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| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.130219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGGTGCC CGTTCTGCCG GCATCCGGAC AGTCGCGTCG TTGACAGTCG GGAGGCCGAG
GAGGGTTCGG CGATCCGCCG CAGGCGGTCC TGCCTGTCCT GCGGTCGCCG GTTCACTACG
ATGGAGGAGG CGTCCCTTCA GGTTCGCAAG CGCAGTGGGG CGGCCGAGCC GTTCAGCCGG
GCCAAGGTCA TCGCCGGTGT CCGCAAGGCC TGCCAGGGCC GGCCGGTGCG GGATGATGAT
CTCGCGCTTC TGGCGCAGCG GGTAGAGGAC GCCGTCCGCT CGTCGGGGTC GGCGGAGGTG
CCCGCGGAGG CGATCGGCCG GGCGATCCTC GGTCCGCTCC GTGAGCTCGA CGAGGTGGCT
TATCTCCGCT TCGCCTCGGT GTACCTGGCC TTCGAGTCGT TGACTGACTT CGAGTCCGCG
ATCGCCGCGT TGCGCTCCGA GGCCGCCGGA CCTCCCACCA CGCGGGATGG ACCAGCACGA
CCGGTCCCGC GTGGCGCCGT CGATGTCTCG CCGGTGATCG GCACCCAGCA GGTGCATAGC
AGGTAG
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| Protein sequence | MRCPFCRHPD SRVVDSREAE EGSAIRRRRS CLSCGRRFTT MEEASLQVRK RSGAAEPFSR
AKVIAGVRKA CQGRPVRDDD LALLAQRVED AVRSSGSAEV PAEAIGRAIL GPLRELDEVA
YLRFASVYLA FESLTDFESA IAALRSEAAG PPTTRDGPAR PVPRGAVDVS PVIGTQQVHS
R
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