Gene Francci3_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3500 
Symbol 
ID3905234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4173867 
End bp4174691 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content71% 
IMG OID637880822 
ProductABC transporter related 
Protein accessionYP_482582 
Protein GI86742182 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.473481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.39004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACG CGGTGCTGCG CCTCGACAAT GTCAATGTCG TGCGAGATGG GTCATACCTG 
CTCAGGAACG TGTCGTGGGC GGTGTTCCCT GGCCAGCGCT GGGTGGTCCT CGGTCCCAAC
GGCGCCGGGA AGACGACCCT GCTGCAGGTG GCCTCGGGCC GGCTGTTTCC CACCAGGGGC
ACGGTCGACC TGCTCGGCGC CCGTCTCGGC AAGGTCAACC TTCTCGATCT ACGATACCGG
GTGGGTGTCG TCAGCCCGGC GCTGGTGGAG ACGCCACCCG CCGACGAGCG GGTACTCGAC
GCGGTGGTGA CCGCCGGCTG GTCCGTGCTG GGCCGCGCCG ACGAGGAGTA CGACGAGGTC
GATCTCACCC GCGCGGCCGG CCTGCTGACC CAGTTCGGGT GCCGTGGACT GGTCGACCGT
CGGTTCGGAA CCCTCTCCGA GGGAGAGCGC AAGCGCGTGC TCATTGCCCG GGCCCTCATG
ACCGACCCGG AACTCCTCCT GCTCGACGAG CCCGCCTCCG GGCTCGATCT GGGTGCGCGG
GAGGCGTTGA TGCGGCGGCT CACCCGCTTC GCGGCCGACC CCATCGCTCC TGTCCTCGTC
CTCGTCAGCC ACCACGTGGA GGAGATCCCG GTCGGGGTGA CCCACGCGTT GCTGGTGCGC
GGCGGCCAGG CGCTTGCGGC CGGTCCGGTC GCGCAGGTCC TCACCGCGCA GGCGCTGTCC
TCCTGCTTCG GGATTCCGTT GGAGGTCGGC GTGGCGGCCG GTCGCTACAC CGCCCGGCTT
GCCGCTGGAC CGCCTCCCCG GCATCCGGTA TCCGCCTCGG TCTGA
 
Protein sequence
MPDAVLRLDN VNVVRDGSYL LRNVSWAVFP GQRWVVLGPN GAGKTTLLQV ASGRLFPTRG 
TVDLLGARLG KVNLLDLRYR VGVVSPALVE TPPADERVLD AVVTAGWSVL GRADEEYDEV
DLTRAAGLLT QFGCRGLVDR RFGTLSEGER KRVLIARALM TDPELLLLDE PASGLDLGAR
EALMRRLTRF AADPIAPVLV LVSHHVEEIP VGVTHALLVR GGQALAAGPV AQVLTAQALS
SCFGIPLEVG VAAGRYTARL AAGPPPRHPV SASV