| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3480 |
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| Symbol | |
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| ID | 3905214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4148285 |
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| End bp | 4149904 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880802 |
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| Product | regulator of polyketide synthase expression-like |
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| Protein accession | YP_482562 |
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| Protein GI | 86742162 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGG ACGTGGCAGC CTCTTCCTCG GATTCCTCCT CGGACACAGT GACTGGGACA
GCCCGCCTTG AACCGGGGGC GCCCCCCGTC CCGACACCGG CAGGCGAGAT CGAGCCGAGC
CCCGAAACCG AGCCGAGCCC CGAAACCGAG CCGAGCCCCG AAACCGAGCC GAGCCCCGAA
ACCGAGCCGA GCCCCGAAAC CGGGCCGGTG CCGGAGCAAT CCGTCGACTA CCCGGAGCCG
CGTATCCCCG ATCTGGGCAA CCCGTGGTCG GCCGGCGGGG CCAGCCCCAG ACCCGCCGGC
GACCAGGCCC GACCCACATC GACCGGGAGC ACATCCGGCG GAGAAAGCAC CAGCGAGGTG
ATCCGCCGGG TGGAACGGTC GAGCGGGATG CTCGCATCCC GGGCGGCGGC CCGGATGGCG
GAGGCGCTGC CCTGGTTCCC GGCCATGTCG GCGAGTCACC GCGCCGGAAT TCAGCTCGTG
GTGCAGGCCG GCATCTCGTC GTTCGTGGAG TGGTGCCGGC GGCCCGAACA CGCCCGGGAT
CTGTCCGAGG ACGTCTTCCG GGTCGCCCCG CGGGAACTCG TCCGCGCCGT GACCTTCCGC
CGACTCGTCG ATCTGGTCCG GGTCGCGGTG GAGGCGATCG AGGCCGAGGT GCCGAACCTG
GCCGGCCCGG AGCACGAACA ACGGCTGCTC GCCGATGTCC TGCGTTACTC CCGTGACATC
GCGTTCGCCG GCGCGGTCGT CTACGCCCGC GCCGCTGAGG AACGCGGTGC CTGGGACGCC
CGGCTGGAGG CGCTGGTCGT CGACCACGTG GTCCGGGGCG AGGTCGACCG GGCGCTGCCG
TCACGGGCGG CCGCGGTGGG CTGGCGTAAC CCGCCGTCCG TCACCGTCAT CGTCGGCACG
GCCGGGAGCA ACTCGCCGGA GGTGGTGGTC GATGAGGTGC ACCGGCTCGC CCGCATGGCC
CAACTGGAGG TTCTCGCCGG GGTCCACCAC GATCGCCTGG TGATGGTGGT CGGCGGGAAT
TTCACTGCCG GCAGGGACGG CATCGGCCGT CCCGAGATGA CCCTCCAGCC GGAGAACAGC
GTCGAACCTC CCGCCACCGC GGGTACCCGT CCGGCCGGCG GCACCGCGCC GGTGAACACT
GTCCTGGACG CGGCCCGGGC ACTGCTTCCC GCCTGCGGGC CGGGCCCGGT GGTGGTCGGC
CCGGTGGTCG GTGACCTGAC CGGGGCACCG CACGCGGCGC GGGTCGCCCT CGCCGCCACG
GACGTGGTCG CCGCCTGGCC AGCCGCACCC CGGCCGGTCA TGGCCCGCGC TCTGCTCCCG
GAACTCGCCC TCGCGGGGAA CGTCGACGCC CGGCGGGCGC TCATCGACGA GGTGTACGCC
CCGCTGCGCG ACGCCGGTAC CCCACTACTG GAGACCACCG GGGCCTATCT CGACTTCGGC
TCGTCGCTGG AGGCGACGGC CCGGGCGCTG TATCTCCACA CCAACACGGT CCGCTACCGA
CTCCGTAAGG CCGCCGAGGT GTGCGGGCTG GATCCGGCGG ACCACCGCGA ACGCTTCATC
CTGCATATTG CGCTCGTTCT GGGACGCCTC GACGGTGTGT TACCTACAGG CAAAACATGA
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| Protein sequence | MLTDVAASSS DSSSDTVTGT ARLEPGAPPV PTPAGEIEPS PETEPSPETE PSPETEPSPE
TEPSPETGPV PEQSVDYPEP RIPDLGNPWS AGGASPRPAG DQARPTSTGS TSGGESTSEV
IRRVERSSGM LASRAAARMA EALPWFPAMS ASHRAGIQLV VQAGISSFVE WCRRPEHARD
LSEDVFRVAP RELVRAVTFR RLVDLVRVAV EAIEAEVPNL AGPEHEQRLL ADVLRYSRDI
AFAGAVVYAR AAEERGAWDA RLEALVVDHV VRGEVDRALP SRAAAVGWRN PPSVTVIVGT
AGSNSPEVVV DEVHRLARMA QLEVLAGVHH DRLVMVVGGN FTAGRDGIGR PEMTLQPENS
VEPPATAGTR PAGGTAPVNT VLDAARALLP ACGPGPVVVG PVVGDLTGAP HAARVALAAT
DVVAAWPAAP RPVMARALLP ELALAGNVDA RRALIDEVYA PLRDAGTPLL ETTGAYLDFG
SSLEATARAL YLHTNTVRYR LRKAAEVCGL DPADHRERFI LHIALVLGRL DGVLPTGKT
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