| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3447 |
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| Symbol | |
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| ID | 3905687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4099095 |
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| End bp | 4101779 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880770 |
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| Product | putative signal transduction histidine kinase |
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| Protein accession | YP_482530 |
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| Protein GI | 86742130 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGGG GGCTGAGCCC TCATGATGAT GAGGTGCGAA GTCGGCCCCC ACCCTGGTCC
GGGCGACCTC CTCGGGCCGG GCAGGGCGTG ACCGCCGACG GGCGGGAGGC GGCCTCGTCC
GGGGTGCGCG AGGCGGTCCC GTCCGTGGCG CCGGCCACCG TGCCCACGGT CGCCTCCGCC
TCCGCCTCCG CCTCCGCGGG CACGGTGACC GCCTTCGGGG AGGGCGCGCT CGAGCTGGGC
CGAGCCTCCG TCGAGCTGGG CCGGGCTTAC CAGGCGCTGG AACAGGTCAT GGGGCGCGTC
CTCGTCACCC TGCGGGCGGT CGCGGTTCTG CTGACGGTGT GCTACGTCGC GGTCTGGCGC
TGGTACGACC ACAGGCCGGC GGCGATGGCC GTCGCGGGGC TGACGGCCAT CGGCGGTCTC
GTCTTCTGCG TCGTCGGCCT GCGACGCGGG ATCCGTCGAT CGATGACCAC CGTCACGGTC
GCGATGTCGG CGGTCCTCGC CCTGACGGCC TCGTCCTGGT TGCCGCCCGC TTCGGTGGGG
GACAGCGGGA ACTTCGTCTT CCTGACCGCC ATCAACGCCG GGATCGTGAC GGTCTGGACA
TTTCCGACGG CCGTCGCGTC GGTCCTGCTC CTGACGCTGT GCGGCGCCAC TCTCGTAGGC
GGCTGGGGCC ACAATCCCCA GGTCTTCTCT CAGACCGCCA TGCTGCTGAT CATTCCCGGT
CTACTCGGGC TGGCGATCGG TCGACTGCGC CGGATCGCCC GCACGGCCGA CCAGCGCTGG
GCGAACGTCG CGGCCCGGCA CCGCAGCGAG GCGGTCGTCC TCGCCGTCGC CCGCGACCGC
CGGGAACGGG AGCGAGTCAT CCACGACACG GTGCTGAACA CCCTGACCGG CATCGCCTGG
GGCGGGGGAC GGGACGTGGA ACTCACCCGG CGTCGATGTG CGCAGAGCCT CACCGCCGTG
CGCGGCCTGC TCGACCGGGA CGACGAGGTC GGTCCGCCGA TCGGCGAGCG GCTGGCCGAG
GTCGTCCGCG ACGCCACTCG ACGGGGGCTG CAGGTCAGCC TCGACGACCA GCGTCTCCCA
GCCATCGCGG GGGAACCTCC CGGTGAGCCC CCGGCGGTGG TCGTGGAGGC CTTCGTCGGA
GCGGTCGGCG AGGCGCTGGT CAACGTGGAA CGGCACGCCG GCACCCGGCG TGCCTCGCTG
CTCCTCGGCG GTGGCCCGGG CCTGCTCATC GTGACGGTGT CCGACGCCGG GTGCGGCTTC
GACCCGCGGC GGGTCGACTC CGCCCGGCTC GGGCTGCGCG AGTCCATCGT CGGACGGCTG
GTGGATGTTG CCGGGACCGC CCGCATCGAC GCGCGCCCGG GGCAGGGCAC CGTTGTGGAA
CTGCAGTGGC GCGCCCCGGA CGCGACGACG GGGCACGTGA CGCGACCACA TCCAAGCGAT
GATCGCGATG ATCGTGGCGA TCGGGATGAT CACGGAGCCG GAAGGGCCGG CGGGCGGGTC
GCCGATCGTC GGGACGTCGC CGCGATCGCC GCCGAGCTAC GCGACGCCTA TGCCGCCGGG
CTGCGCCGGG CGCTCGGGCA GATCGCCGGG CTGTGGCTGA TCATCATGCT CGTGCCGTTG
GTCGGCACGG GTGGGTGGGT GCGGACGATG GCCGGAGCGG GAGCGCTGTG GCTGCTGGTG
GCCGTGCTCA CCGTCGTCTT CGTCCGGCGC GGACGGAGTC GGCCGATCAG CGGTCCCGAG
GCGGCCGTGC TGCTGTTCCT GGCCGTCGCC GTCGCCGTCG CCGGCATAGC GAACACCGTC
GGCGCGGACA TCGTCCGGAT TGCGGACTGG CCGTTGCTCG TGCTTCCCCT GCTCCTAGCG
TTCATCACCG CCTCCCGGCC ACTCTGGGAA TGGGTGGGTG CGCTGCTGGT CGCGATTGCC
ATGATGATCG TTGCGGTGTT CCTGCGCGGT AGCACCGAAT CGCTGGTGCT GGCGCGGCTG
GGGGTACTGA TCTACGGTGC GTGCGGGGTG CAGATCGTGA CCGCGATGCT GGGTCCCCTG
CTGCGCGGCA CCGCGGAGAC GACCGCCCGC GCCTTGGCCG CCGAGGCTGA GGTCGCCGCC
CAGGTGGATG CGTCCACCAT GATCAGGTGG GAGCGGGCGC AGTGGTTGCG CACCGTGGGG
TGGGAGGTGC TGCCGTTACT CGACGGGGTC GCGGGCGGTT GGTTGGACCC GCGGGAAGCC
GCCGTTCGGA GCAGGTGCGC GATGCGGGCG GCCGCTGTCC GTCGCATGAT CACCGGGGGT
GGTCCGTCGT CGGCGCTGGC GGACCTCGAC GTGGTCGTCG CCGACGCCGA GGCCGCGGGA
ATGACCGTCC AGATCCAGCT GTCCGGCGAT CTGCGGCTCG CGCCAGCTCC TGTGCGGGCC
ATGGTGGCCG ATCAGGTGCG GGAGGTGCTC GCCGCCGTCC CCGGCGGCCG GGCGATTGTG
ACGGTCCTGT GGACGCCGGC CGGCGGCAGT GTTTTCGTCT CGCTGCCCTG GCCGCAGGGC
CTGCCGCCCC CGCAGCTCGG CCGCGGGGGA GAGGACGCGG GCGGGATCGA GGTCGCGGTG
GAGCTGGACG ATCGGTGTCT CAGCCTGGAG CTGACCTGGC CGGCGGCGAG CGCGGTCACG
GACCCGACCG GGCGGGTCGA GTCGATCGGT GGGCTGGCGG AGTAG
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| Protein sequence | MLRGLSPHDD EVRSRPPPWS GRPPRAGQGV TADGREAASS GVREAVPSVA PATVPTVASA
SASASAGTVT AFGEGALELG RASVELGRAY QALEQVMGRV LVTLRAVAVL LTVCYVAVWR
WYDHRPAAMA VAGLTAIGGL VFCVVGLRRG IRRSMTTVTV AMSAVLALTA SSWLPPASVG
DSGNFVFLTA INAGIVTVWT FPTAVASVLL LTLCGATLVG GWGHNPQVFS QTAMLLIIPG
LLGLAIGRLR RIARTADQRW ANVAARHRSE AVVLAVARDR RERERVIHDT VLNTLTGIAW
GGGRDVELTR RRCAQSLTAV RGLLDRDDEV GPPIGERLAE VVRDATRRGL QVSLDDQRLP
AIAGEPPGEP PAVVVEAFVG AVGEALVNVE RHAGTRRASL LLGGGPGLLI VTVSDAGCGF
DPRRVDSARL GLRESIVGRL VDVAGTARID ARPGQGTVVE LQWRAPDATT GHVTRPHPSD
DRDDRGDRDD HGAGRAGGRV ADRRDVAAIA AELRDAYAAG LRRALGQIAG LWLIIMLVPL
VGTGGWVRTM AGAGALWLLV AVLTVVFVRR GRSRPISGPE AAVLLFLAVA VAVAGIANTV
GADIVRIADW PLLVLPLLLA FITASRPLWE WVGALLVAIA MMIVAVFLRG STESLVLARL
GVLIYGACGV QIVTAMLGPL LRGTAETTAR ALAAEAEVAA QVDASTMIRW ERAQWLRTVG
WEVLPLLDGV AGGWLDPREA AVRSRCAMRA AAVRRMITGG GPSSALADLD VVVADAEAAG
MTVQIQLSGD LRLAPAPVRA MVADQVREVL AAVPGGRAIV TVLWTPAGGS VFVSLPWPQG
LPPPQLGRGG EDAGGIEVAV ELDDRCLSLE LTWPAASAVT DPTGRVESIG GLAE
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