Gene Francci3_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3443 
Symbol 
ID3905683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4094977 
End bp4095447 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content71% 
IMG OID637880766 
Producthypothetical protein 
Protein accessionYP_482526 
Protein GI86742126 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAT CGCTCGAGGA CGCCCGTCGG ATCATCGCCG CCGGGGAGAA ATATGCGGTT 
CACCTCGGTC AACCGGTTAA CATTGCTGTC GTTGACCACG CCGGAATTCT GGTTGCCCAC
GTCCGGATGG ACAATGCCCG GCTCGAGACC GCGGATATCT CCGTCGACAA GGCGTGCGCG
GCTCGGGCCT GGGCTCCGCC GGCCCATCTG GTCAGTCATA CCGGTGGCGA GGGACACGCT
GGCGGCGAGG CGCATGCCGG CGGCGAGGCG CATGCCGGCG GCGAGGCACC TGCCACGGGT
GACGGCCGCG TCGGACGGGA GCGTCCGTCG CCGGCGGAAC CGGTCGTCAC CGGTCTGCCC
GGTGCGCTGC CGCTGTGGCG GAACGGGGTG ATCGTGGGGG CCGTCGGGGT GAGCGGTGGT
CCCGCCCCCC TTGACCAGGC CATCGCCCGG GCCGCCGCGG CGGCGTTCTG A
 
Protein sequence
MTVSLEDARR IIAAGEKYAV HLGQPVNIAV VDHAGILVAH VRMDNARLET ADISVDKACA 
ARAWAPPAHL VSHTGGEGHA GGEAHAGGEA HAGGEAPATG DGRVGRERPS PAEPVVTGLP
GALPLWRNGV IVGAVGVSGG PAPLDQAIAR AAAAAF