Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3423 |
Symbol | |
ID | 3905663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4070857 |
End bp | 4071639 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637880746 |
Product | enoyl-CoA hydratase / short chain enoyl-CoA hydratase |
Protein accession | YP_482506 |
Protein GI | 86742106 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.314952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGT CCGGAGACAT CGCGGTACAG ACCCTGCCCG GCCACGTCGC CGTCGTCGAG GTCTGCCGTC CGCCGCACAA CTTCTTCGAC GTGCGCCTGA TCCAGACCCT CGCCGACATC TACGACAAGC TCGGCGCCGA CTCCGACGTC CGTGCCGTCG TGCTGTGCTC CCAGGGCAGG AACTTCTGCG CCGGAGCCGA CTTCTCCGGC GCGAGTGCGG CCGAGGCGAT CTCGGCGGAC GAGGGGGCGC CGGCCCTCTA CCGCGAGGCG CTACGGCTGT TCGCCTCCCC GATACCGGTC GTGGCCGCGG TGCAGGGCAG CGCGGTCGGC GGCGGGCTGG GGCTCGCGCT GTCCGCGGAC TTCCGGGTCG CAAGCCCGGA CAGCCGCTTC GCGGCGAACT TCTCCCGGAT CGGGCTGCAC CAGGGCTTCG GCATCTCGGT GACCCTGCCG GCGGTCGTCG GCCGGCAGAA GGCGCTCGAC CTGCTCTACA CCGGTCGCCG GGTTGGTGGG CAGGAGGCGT TCGACATCGG CCTCGCCGAC CGGCTCGTGC CGAACGCCGA GCTGCGGGAG GCCGCGGTGG CGCTGGCCGG TGAGGTCACC GCCGCCGCGC CGCTGGCCGT GCGCAGCATC CGGGAGACGA TGTGGGCGGA TCTCGTCCCC GTCATCCGGG CGGCCACCGA GCGGGAAACC GCCGAGCAGG CCAGACTGCG GGCCACCGAG GACTTCGCCG AGGGGGTGCG CGCCTCGACG GAGCGCCGCG CGCCCCGTTT CACCGGCCGC TGA
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Protein sequence | MSESGDIAVQ TLPGHVAVVE VCRPPHNFFD VRLIQTLADI YDKLGADSDV RAVVLCSQGR NFCAGADFSG ASAAEAISAD EGAPALYREA LRLFASPIPV VAAVQGSAVG GGLGLALSAD FRVASPDSRF AANFSRIGLH QGFGISVTLP AVVGRQKALD LLYTGRRVGG QEAFDIGLAD RLVPNAELRE AAVALAGEVT AAAPLAVRSI RETMWADLVP VIRAATERET AEQARLRATE DFAEGVRAST ERRAPRFTGR
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