Gene Francci3_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3407 
Symbol 
ID3905647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4042320 
End bp4043426 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content75% 
IMG OID637880730 
Producthypothetical protein 
Protein accessionYP_482490 
Protein GI86742090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.741833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCAG ATGAGGAGAT CAACGAGTTG TTCGCCGTCC CGAGCCCGTG CGCGACGCTG 
TACCTGGGCC TGTCCGATCA GATGGACGGG ATTGCGGCGG ATCGGGCGGT CCGGTGGCGG
CGCCTGCGCG ACAGCCTGGC CGCCGACGGG GCGGATGGCG CGACGCTGGG CGCGTTGGAC
GAGGTTGTGG CGTCCCTCGG CCCGCAGAAC GCCGCTCTCG CGGCGTGCGC CGCGGATGGC
AGGGTGGTCT GGTGTCATCG GCTGCGACGG CAGGTGGCGG ACCGGGCCGT CTGGGGCTCG
CTGCCCTGCA CGTTGCCGAT GCTTGCCTAC CGGCAGAGCA GCGTGCCCTG TGTGGTCGTG
CTCACCGACC GGACGGGCGC CGACCTGCGG GTGGCCGGGG ACGGACTGCG GTTCGCCGGT
GAGGTCGTCG GCTCCGACGA CGAGATCGAG CGCAATGCCC CCGGCGGCTG GTCGCAGCGC
CGCTACCAGG ATCGTGCCGA GGACTCGTGG GATCACAACG CCGCGCAGGT CGCCGAGGCG
GTGACCGAGC TGACCGAGCG GGTGGACGCC GCGCTGGTGG TTCTCGCGGG AGACGCCCGG
GCCGTGCAGC TGCTGCGCAA GCATCTGCCG CCCCGGGTGA CCCCGCTGGT CCACCAGCTC
GAACACGGGG GACGTCACCC CGGGCGGAGC GACCGGTTCC ATTCCCAGGA GGTGCGGGAG
CTGGTCGAGG CCGAGGTTCG CGACCGGACC CGCGCCGTGC TCGACCGCTT CGCCGAGGAC
CGCGCACACG GCCGGGCGAT CGACGGGGTG CCCGCGACGC TCGCCGCGCT CGTCCGCGCT
CAGGTGGGCA CGCTGCTCGT CGTCGACGAC CCCGGCGACG ACCGGGCCGC CTGGTACGGG
CCGGAGCCCG GGGACGTCGC CACCGAGCCG GGCGCGCTGG CCCGGCTGGC CCGCCGGGCC
GGGTCACCAC CGACCACCGG CCGGTTGGCG GATCTGGCCG TGCGGGCCGC TTGGGGCACC
GGCGCGGCCG TGCGGGTCCT GCCCGCCGAT CTGCCCGGCG CACCGACCGA CGGTCTTGGT
GCCCTGCTGC GCTACCCGTC CCCGTGA
 
Protein sequence
MIPDEEINEL FAVPSPCATL YLGLSDQMDG IAADRAVRWR RLRDSLAADG ADGATLGALD 
EVVASLGPQN AALAACAADG RVVWCHRLRR QVADRAVWGS LPCTLPMLAY RQSSVPCVVV
LTDRTGADLR VAGDGLRFAG EVVGSDDEIE RNAPGGWSQR RYQDRAEDSW DHNAAQVAEA
VTELTERVDA ALVVLAGDAR AVQLLRKHLP PRVTPLVHQL EHGGRHPGRS DRFHSQEVRE
LVEAEVRDRT RAVLDRFAED RAHGRAIDGV PATLAALVRA QVGTLLVVDD PGDDRAAWYG
PEPGDVATEP GALARLARRA GSPPTTGRLA DLAVRAAWGT GAAVRVLPAD LPGAPTDGLG
ALLRYPSP