Gene Francci3_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3398 
Symbol 
ID3905980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4028999 
End bp4030681 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content72% 
IMG OID637880720 
Productcell divisionFtsK/SpoIIIE 
Protein accessionYP_482481 
Protein GI86742081 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000750555 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTGC TGCGGGTCCG GCAGGGCCGA ATCAGAAAAG ATCAATTTCG GTTGGCGTTA 
CGGCCGTCCG TCCCTGAACT GCTGCTGCGC TACGGGCTGC GCTACGTCGC CTCGTGGTGG
CGGGAAGCGC TCGCCGTTGT CCTCGCGCTG CTGATCTACC GGCGGGCGGT CGATGCCCTC
GGGCCGGTCG GCGGGCGGGG GCTGCTCGTC GGCCTGGTGC TCGTCGTCGC CGGAGTGCCG
CGGCTGCGCG CTGCCGTTCT CGGCTGGCTG CTCGGCGGGC GGCTACGCCG ACGGTGGGCG
GCGGCCTGCC GGGCCTGCGG CCTGGAAACC ACGAGGCACA CCGTGCTGCG AACACCACGG
ATTCGCCGGG CCTGGCGCGG TGCGGCCGGC TGGCATCTGC GGATCACCCT CGCCCCCGGA
CAGTCCGTGG ACGACCTCCA GCAGGCCGCA CCCCGGCTGA CCGCCACGTT AAAACTCCGG
GAACTGCGGA TCTCCCCGAA CCTTGCCCGC GCCGACCGGG TCGGCGCGGT CCTGGTGCAC
CGGGAAGTCC TGGGCCGACC GATCCGCGCG GACCTGCTTC CCCCCGGCGA TCCTGGTGAT
CTCGACCGGC TGCCCATCGG CGCCCGGGAA GACGGCACGG CCTGGCTGCT GCCCCTGCGC
GGCTCGCATG TCCTCGTCGC CGGTGCGACC GGCGCGGGCA AAGGATCGGT GTTGTGGTCG
ACGATCCGGG CGTTGGCCCC GGCGATCCGT GGCGGCCTGG TTGAAATCTG GGCCTGTGAT
CCCAAAGGTG GCATGGAGTT AGCGTTCGGC GAGCCGCTGT TTCACCGCTT CGCGGTCGAC
ACCCCATCGA TCGCGGATCT ACTCGCGGAC GCGGTCCGGG TGATGAACCG GCGCACCGGC
CGGCTACGCG GGGTCTCCCG GCTGCACAAA CCGTCCACCG ATGATCCGCT GATCATCGTC
CTGGTCGACG AAATCGCCAG CCTCACCGCA TATGTCGCGA ACCCGAAGCT GAAAAAGCAG
ATCGCGGCAT CCCTGTCCCT GCTGCTCTCC CAGGGACGCG CCCCCGGGGT CGTCGTGGTC
GGCGCGGTCC AAGACCCCCG GAAAGAGGTA CTGCCGCTAC GAGACCTGTT CCCCGTGCGC
ATCGCGCTGC GGATGACCGA AGCCGACCAA GCCGACATGG TCCTCGGCAA CGGCGCGCAT
GACCGCGGCG CACGGTGCGA ACGCATCCCC CGCGCCCTGC CCGGTGTCGG CTACGTCCTC
GTCGACGGCG ACCCCACCCC CGTCCGGGTA CGGGCCGGCT GGCTGGCTGA CGACGACATC
CGCACCATGG CCGCGCACCA CACCCAACCC GCCGCGCAGC CCCCGACGCA CCGCCCGGCA
ACCCCGCCCG TCCGACCGGC CGCGCTACCG CCCACCACCG CCGGGCAGGG CTGGACCCCC
GACCTGACCG CTTTCCCCCC GCCCCCGGTA GGCCGCACCC GACCGGGGGC ACCCGGCAGC
GTCCAAGGCG GCGGGAAAGC CGGGGAGGAA GACGATCCGA CGATCCCGCT CCGCGGCTGG
CGGTCACCTC CACCCCCCGC TCTACCCCCC GCACCCCCGT CGATCGACGC GGACGACGGC
AGTCCCGAAG CCGAAGCCGC CTGGCGGGCC TGGGAAGCCC ACTTCCCCGG CGAACCCGGC
TAA
 
Protein sequence
MAVLRVRQGR IRKDQFRLAL RPSVPELLLR YGLRYVASWW REALAVVLAL LIYRRAVDAL 
GPVGGRGLLV GLVLVVAGVP RLRAAVLGWL LGGRLRRRWA AACRACGLET TRHTVLRTPR
IRRAWRGAAG WHLRITLAPG QSVDDLQQAA PRLTATLKLR ELRISPNLAR ADRVGAVLVH
REVLGRPIRA DLLPPGDPGD LDRLPIGARE DGTAWLLPLR GSHVLVAGAT GAGKGSVLWS
TIRALAPAIR GGLVEIWACD PKGGMELAFG EPLFHRFAVD TPSIADLLAD AVRVMNRRTG
RLRGVSRLHK PSTDDPLIIV LVDEIASLTA YVANPKLKKQ IAASLSLLLS QGRAPGVVVV
GAVQDPRKEV LPLRDLFPVR IALRMTEADQ ADMVLGNGAH DRGARCERIP RALPGVGYVL
VDGDPTPVRV RAGWLADDDI RTMAAHHTQP AAQPPTHRPA TPPVRPAALP PTTAGQGWTP
DLTAFPPPPV GRTRPGAPGS VQGGGKAGEE DDPTIPLRGW RSPPPPALPP APPSIDADDG
SPEAEAAWRA WEAHFPGEPG