Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3398 |
Symbol | |
ID | 3905980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4028999 |
End bp | 4030681 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880720 |
Product | cell divisionFtsK/SpoIIIE |
Protein accession | YP_482481 |
Protein GI | 86742081 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000750555 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGTGC TGCGGGTCCG GCAGGGCCGA ATCAGAAAAG ATCAATTTCG GTTGGCGTTA CGGCCGTCCG TCCCTGAACT GCTGCTGCGC TACGGGCTGC GCTACGTCGC CTCGTGGTGG CGGGAAGCGC TCGCCGTTGT CCTCGCGCTG CTGATCTACC GGCGGGCGGT CGATGCCCTC GGGCCGGTCG GCGGGCGGGG GCTGCTCGTC GGCCTGGTGC TCGTCGTCGC CGGAGTGCCG CGGCTGCGCG CTGCCGTTCT CGGCTGGCTG CTCGGCGGGC GGCTACGCCG ACGGTGGGCG GCGGCCTGCC GGGCCTGCGG CCTGGAAACC ACGAGGCACA CCGTGCTGCG AACACCACGG ATTCGCCGGG CCTGGCGCGG TGCGGCCGGC TGGCATCTGC GGATCACCCT CGCCCCCGGA CAGTCCGTGG ACGACCTCCA GCAGGCCGCA CCCCGGCTGA CCGCCACGTT AAAACTCCGG GAACTGCGGA TCTCCCCGAA CCTTGCCCGC GCCGACCGGG TCGGCGCGGT CCTGGTGCAC CGGGAAGTCC TGGGCCGACC GATCCGCGCG GACCTGCTTC CCCCCGGCGA TCCTGGTGAT CTCGACCGGC TGCCCATCGG CGCCCGGGAA GACGGCACGG CCTGGCTGCT GCCCCTGCGC GGCTCGCATG TCCTCGTCGC CGGTGCGACC GGCGCGGGCA AAGGATCGGT GTTGTGGTCG ACGATCCGGG CGTTGGCCCC GGCGATCCGT GGCGGCCTGG TTGAAATCTG GGCCTGTGAT CCCAAAGGTG GCATGGAGTT AGCGTTCGGC GAGCCGCTGT TTCACCGCTT CGCGGTCGAC ACCCCATCGA TCGCGGATCT ACTCGCGGAC GCGGTCCGGG TGATGAACCG GCGCACCGGC CGGCTACGCG GGGTCTCCCG GCTGCACAAA CCGTCCACCG ATGATCCGCT GATCATCGTC CTGGTCGACG AAATCGCCAG CCTCACCGCA TATGTCGCGA ACCCGAAGCT GAAAAAGCAG ATCGCGGCAT CCCTGTCCCT GCTGCTCTCC CAGGGACGCG CCCCCGGGGT CGTCGTGGTC GGCGCGGTCC AAGACCCCCG GAAAGAGGTA CTGCCGCTAC GAGACCTGTT CCCCGTGCGC ATCGCGCTGC GGATGACCGA AGCCGACCAA GCCGACATGG TCCTCGGCAA CGGCGCGCAT GACCGCGGCG CACGGTGCGA ACGCATCCCC CGCGCCCTGC CCGGTGTCGG CTACGTCCTC GTCGACGGCG ACCCCACCCC CGTCCGGGTA CGGGCCGGCT GGCTGGCTGA CGACGACATC CGCACCATGG CCGCGCACCA CACCCAACCC GCCGCGCAGC CCCCGACGCA CCGCCCGGCA ACCCCGCCCG TCCGACCGGC CGCGCTACCG CCCACCACCG CCGGGCAGGG CTGGACCCCC GACCTGACCG CTTTCCCCCC GCCCCCGGTA GGCCGCACCC GACCGGGGGC ACCCGGCAGC GTCCAAGGCG GCGGGAAAGC CGGGGAGGAA GACGATCCGA CGATCCCGCT CCGCGGCTGG CGGTCACCTC CACCCCCCGC TCTACCCCCC GCACCCCCGT CGATCGACGC GGACGACGGC AGTCCCGAAG CCGAAGCCGC CTGGCGGGCC TGGGAAGCCC ACTTCCCCGG CGAACCCGGC TAA
|
Protein sequence | MAVLRVRQGR IRKDQFRLAL RPSVPELLLR YGLRYVASWW REALAVVLAL LIYRRAVDAL GPVGGRGLLV GLVLVVAGVP RLRAAVLGWL LGGRLRRRWA AACRACGLET TRHTVLRTPR IRRAWRGAAG WHLRITLAPG QSVDDLQQAA PRLTATLKLR ELRISPNLAR ADRVGAVLVH REVLGRPIRA DLLPPGDPGD LDRLPIGARE DGTAWLLPLR GSHVLVAGAT GAGKGSVLWS TIRALAPAIR GGLVEIWACD PKGGMELAFG EPLFHRFAVD TPSIADLLAD AVRVMNRRTG RLRGVSRLHK PSTDDPLIIV LVDEIASLTA YVANPKLKKQ IAASLSLLLS QGRAPGVVVV GAVQDPRKEV LPLRDLFPVR IALRMTEADQ ADMVLGNGAH DRGARCERIP RALPGVGYVL VDGDPTPVRV RAGWLADDDI RTMAAHHTQP AAQPPTHRPA TPPVRPAALP PTTAGQGWTP DLTAFPPPPV GRTRPGAPGS VQGGGKAGEE DDPTIPLRGW RSPPPPALPP APPSIDADDG SPEAEAAWRA WEAHFPGEPG
|
| |