Gene Francci3_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3373 
Symbol 
ID3905955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4003293 
End bp4004093 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content72% 
IMG OID637880696 
Productmethyltransferase type 11 
Protein accessionYP_482457 
Protein GI86742057 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.104552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA TCGGGGGGCT CGCCCTGGAC GAGGAGGCGG TGTTCGCCGA CTTCGCCGCC 
CGGGTACCAC TGGCCGGAGC GGACGTGGTC GAGATCGGTG GGTCTCTTCC CCCCCACCAC
GCACGGGCCT GCGACGTGGC TTCCTGGGTC GCCGTCGACC CCCGTCGCCC GGCCCGGGGG
GACGCCCGGG ACCGGTACCG TGTCCTGCCC GTGCCGGCCG AGCAGATGCC GGTACCCGAC
GGCGGCGCGG ACGCCGTGTT CTCCAGCAAC GCCTTCCAGT TCGTGGACGT ACCCGCCGTG
CTCGCCGAGG TCCACCGGGT CCTGCGTCCC GGGGGCCTGC TGTACGCGCA CTTCGGCCCG
ATCTGGAGTG CGGTGGACGG GCACCAGCTC GAGTACGTGC GCTACCGGGA GCAGGACCTG
CTCTTCTGGC GCGACACCCT GTTACCGCCC TGGGCCCATC TCGCCTACTC CCGGGACGAG
CTGCGGGCGT TGCTGGCCAG TGCACTGCCT GCCGACCTCA TCGATCTCCT GGTCTGGCAC
GTGTTCGACA GCGACACCGT CAACCGGATG TTCTTCGAGG ACTACGTGCA GGCCGCGCTC
GGGTCCGGTC TGGACTGGGT GCAGGTGAGT GCCACGCACG AGCTGGACTA CCGCCTGGAT
CTTCCCGCCT TCGACCCGAG CCTCCTGCGC ACGGTCGACC CCGGGCAGCT CGCCGCCCGG
TGGTCCGCCC GCCGCGGCGC CCCCACCCGC CCGGGTCCGC GGGACGTCCT CATGGTGCTG
CGTCGCCCGG AGGACCGGTG A
 
Protein sequence
MSVIGGLALD EEAVFADFAA RVPLAGADVV EIGGSLPPHH ARACDVASWV AVDPRRPARG 
DARDRYRVLP VPAEQMPVPD GGADAVFSSN AFQFVDVPAV LAEVHRVLRP GGLLYAHFGP
IWSAVDGHQL EYVRYREQDL LFWRDTLLPP WAHLAYSRDE LRALLASALP ADLIDLLVWH
VFDSDTVNRM FFEDYVQAAL GSGLDWVQVS ATHELDYRLD LPAFDPSLLR TVDPGQLAAR
WSARRGAPTR PGPRDVLMVL RRPEDR