| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3331 |
|---|
| Symbol | |
|---|
| ID | 3904117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3948641 |
|---|
| End bp | 3949546 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637880656 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482417 |
|---|
| Protein GI | 86742017 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.133853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCGC AGACCCGCCT CTTCATCGGG GCGCTGTCCG GTGCGTTGGT CGGCCTGGGA
TGCTGGCTGC TGCTCGTCGC CTTGCTGCAG GACCGGGACG TCCCCGCCGG CCGGAGCCGC
CCTGTTGGCT GGGGCCGCCG GCTGCCGGGC GGGCCCCGGG AGGGCCGGCC GTCCGACGCC
GGGATGGCCG GGTGGGGTGC GGAGTTCGTG TTGCCGGTGG CGGGCGGCGT GCTCGCTGGT
CTGATCCTCG GCGTCGTGGT CGGTGTGCCG GTGCTCGGGG TGCTGGGTGG TGGCGCCGCG
TGGCTGACGC ACGACGTCCG GCGGGGTCCA AGCGTCGACG AGCTGAACGA GCTCGGTGAG
GCGGTCGCGA CCTGGTGCGA GACGGTGCGC CAGGAACTCG ACGCCGGGCA GCCGCTGAAG
GCGGCGGTGG TGGCGTCGTG TCAGCTGCCC CCGTCCGCGC TCGCCGGGCC GTTGGGCCGG
TTACGGGTCC GCCTCGATCA GGAGCCGTTG CCGGCGGCGC TGGCCGGCTT CCGGGCGGAG
GTGAACCATC CGCTTGTCGG GTCGATCGCC GCCGTGCTGT CGCTGACCTA CCGGCGGGGC
GCCGGGGACC TGGCGCGGCT GATGGCCGAG CAGGTCGAGT CGACCCGCCA CCGGGTCGCG
GTGCTGCGGG ATCTGCATGC CGCCCGGGCC CGCTACCGCC GGTCGATGGT GCTGCTGCTC
GGCCTGTTTG CCGTGTCCGT CGTCGGTGTC CTGGCGGTAT GGCCGGCGAT GCTCGCTCCC
TACCGCACCG CCTGGGGGCA GGCGGTCCTC ATCATGATCG CCGGCGTTGT GGGTCTGGCG
GTGCGGACCC TGCTCCGGCT GGCCCGGCCC GCCGTGGTCC CCGACTTCTT CGGCGACGCG
ACATGA
|
|---|
| Protein sequence | MNAQTRLFIG ALSGALVGLG CWLLLVALLQ DRDVPAGRSR PVGWGRRLPG GPREGRPSDA
GMAGWGAEFV LPVAGGVLAG LILGVVVGVP VLGVLGGGAA WLTHDVRRGP SVDELNELGE
AVATWCETVR QELDAGQPLK AAVVASCQLP PSALAGPLGR LRVRLDQEPL PAALAGFRAE
VNHPLVGSIA AVLSLTYRRG AGDLARLMAE QVESTRHRVA VLRDLHAARA RYRRSMVLLL
GLFAVSVVGV LAVWPAMLAP YRTAWGQAVL IMIAGVVGLA VRTLLRLARP AVVPDFFGDA
T
|
|---|
| |