Gene Francci3_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3319 
Symbol 
ID3904105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3934090 
End bp3934764 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID637880644 
Productacetyl/acyl transferase related protein 
Protein accessionYP_482405 
Protein GI86742005 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.753993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG CCTCTCTGTA TGCACCGGTG CACATTGAGG AGAGCACCGT GGTGGGCGAG 
CACTGCGTTT TCGGCTACCC GAAAGAGGCG CGCCTGCGGG CCCAGCAGAA GGGGTCCGGC
TCGACCTCGT CCGGGGAACC GGTGGTGGTG GGGGCGCACT GCGTGATCGG TAATCAGGTC
GTGGTCCACG AAGGGGTCTG GATCGGCGCG AACTGCGTCA TCGAGGACCG CGTGCGGATC
GGCTACAACT GCGTGGTCGG CGAACGAACC CGTGTCGCCT ATGGAGCGTA TGTGTGTGAT
CGTGTCGCGA TCGGCGTGGA CGCCTGCGTG GCGGGATTCG TCTGTGACGG CACGACCATC
GGCGATCGCT CCACAATGAT GGGCGATCTC GTGCACGAGT ACGCCCGTCC CCACGAAGGC
TGGTGGGAGG TCGACGAGGA GCCTCCGATG ATCGAAGCTG ACTCCGTGGT CGGCTACGGC
GCGAGGGTGG TGGGCGGCGT CCGTATCGGC CCACGCAGCT ACGTTGCCGC GGGCGCCGTG
GTAACCCGGG ACGTTGCACC GGATCATGTG GTTACGGGCA TCAACGTCCA CGTTCCGGCC
GAGCGGTGGC GAGGACGCCG GCTGCAAGGC TTGATCCGCC ACTGGCAGGC TCTGGCGAAG
ACAGACAGGC TGTGA
 
Protein sequence
MNIASLYAPV HIEESTVVGE HCVFGYPKEA RLRAQQKGSG STSSGEPVVV GAHCVIGNQV 
VVHEGVWIGA NCVIEDRVRI GYNCVVGERT RVAYGAYVCD RVAIGVDACV AGFVCDGTTI
GDRSTMMGDL VHEYARPHEG WWEVDEEPPM IEADSVVGYG ARVVGGVRIG PRSYVAAGAV
VTRDVAPDHV VTGINVHVPA ERWRGRRLQG LIRHWQALAK TDRL