| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3282 |
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| Symbol | |
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| ID | 3904453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3885159 |
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| End bp | 3886763 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880607 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_482368 |
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| Protein GI | 86741968 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.586249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGC TCTGGGATGC GGTAGGCACC AACGCCCGCC CGAAGACGGC ACTGCACCTG
CCGTTCGAGG GACGATCCGT ACCCGTCACG CAACTGCTGG CCGACGCCGA GCGGACGGCA
ACAGTGATCG CCGGCCGGCG TCGCGTCGGC ATCCTGATGG CCAACGGCGA ACCCTGGCTG
CGCGGGCTGC TCGCGTGCTT CCGGATCGGG GCTGCCGCGG TGCCCATCGC CCTCCCCGTG
GCGTTCGGGA GCAGCGAGGG CTACCAGAAG CACCTGCGCC GCGTCATCGA GGATGCCGAG
CTGGAGACCC TGCTGGTGGA CGGCCAGAGC GCGCACCTGC TCAGCCGGCT CGGAACGTTG
CCGAACGTCC GGCTGGACGA CATCACGGAG GTACCCGAGC CGGCCGGGCC GGTCGGTGAG
AACCCGGCCG ACGAGTTCGC GGTGATCCAG TACACCTCCG GTAGCACCTC GGCGCCCAAG
GGTGTCGCGC TGACCGCCGA CACCATCCTG GCCGGCCTGG CGGCCATAGC CGACGGCCTG
GGCCTGACCG AGACCGACGA GATCGGCATC TGGCTACCGC TGTTCCACGA CATGGGCCTG
TTCGGCATGC TCGCGCACCT GGCCAGGGGC TGCTCAGTCA ACCTCTGGCG CACCACCGAC
TTCCTCCGGG ACACCCGCGG GTGGCTGGCT GGCGCGGCGG CGTCCGGCGC CAGCGTGCTG
CCCATGCCCA ACTTCGCCTA TCAGCGCATG GTCGACGCGG TCGAAGCCGG CGGTGCTCCC
GACGGACTCG ATCTGTCCGG GTGGCGGGCC GCCTGCAACG GCGCCGAGCC CGTGCGGTGG
TCGACGCTGG AGGCATTCAA CCGGGTGTTC GGCCCGTACG GGTTCCGGCC CGAGGCGATG
CTTCCGTGCT ACGGCATGGC CGAAGCCACG CTCGTCGTCA GCTGGGCGAC GCCGAAGGAC
CTGCCGTGGC ACCTCACCGT CGACCGGTTC GCCCTCGCGC CGGGCGACGA GGTCGCCCGC
GTCGCCCCGG AGGCCGACAA CGCCCGTGAG GTCGTCGCCT GCGGTTCGGC GGCGCCGGGC
ATCGCCTTCC GGATCGACGC CCCGGGTGCC GGTCAGGTCG GTGAGGTCCA GATCCGTGGC
GCGGCCGTGA TGGGCGGCTA CCTCGGGCTG CCCGCCGACC AACAGCCCTT CACCTCCGAC
GGCTGGTTGC GCACCGGCGA CCTCGGGTTC GAGGCCGAGG GCGAGTTGTT CCTGGTCGGC
CGCCTCAAGG ACATGGCAAT CATCCGCGGT CAGAACTACT ACGCCGAAGA CGTTGAGCAG
ATCGCGCGCC GCGTCCAGGG TTTCGACGTC CGGGCCTGCG CCGCCCTCCA GGCCAGGGAC
GGCGGCTTCG AGCACCTCGC GGTCCTCGTC GAGACGCCGC TCGAGGGTGC GGAGGCCGCC
GCTCTGACGA GTGCCGTCGA GGCGGCCATC TCCGCTGAGC TCGGCCCCGG GGTGGCGTTC
GTGCACCCCG TGCCCGTCCG CTCCATCCCG CACACCAGCT CCGGCAAGGT TCGCCGCCAA
GCCGCCAGGG ACCTCTACCA GAAGACCGTG AAGGACGCCT CATGA
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| Protein sequence | MSALWDAVGT NARPKTALHL PFEGRSVPVT QLLADAERTA TVIAGRRRVG ILMANGEPWL
RGLLACFRIG AAAVPIALPV AFGSSEGYQK HLRRVIEDAE LETLLVDGQS AHLLSRLGTL
PNVRLDDITE VPEPAGPVGE NPADEFAVIQ YTSGSTSAPK GVALTADTIL AGLAAIADGL
GLTETDEIGI WLPLFHDMGL FGMLAHLARG CSVNLWRTTD FLRDTRGWLA GAAASGASVL
PMPNFAYQRM VDAVEAGGAP DGLDLSGWRA ACNGAEPVRW STLEAFNRVF GPYGFRPEAM
LPCYGMAEAT LVVSWATPKD LPWHLTVDRF ALAPGDEVAR VAPEADNARE VVACGSAAPG
IAFRIDAPGA GQVGEVQIRG AAVMGGYLGL PADQQPFTSD GWLRTGDLGF EAEGELFLVG
RLKDMAIIRG QNYYAEDVEQ IARRVQGFDV RACAALQARD GGFEHLAVLV ETPLEGAEAA
ALTSAVEAAI SAELGPGVAF VHPVPVRSIP HTSSGKVRRQ AARDLYQKTV KDAS
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