| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3273 |
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| Symbol | |
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| ID | 3904444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3874284 |
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| End bp | 3876272 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880598 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_482359 |
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| Protein GI | 86741959 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.433163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG ACCGCTTTGG CGTCGCCGCG CTCTCCGAAG CATTCGGGAT CGACATGGTC
TCGGTCGACG GGCTGGGCAC CGGCGCCGCC TGGGGCCGGG TCGCACCGGG CGTCGCCTCG
GCGCACCACC GGCACGACGA AACCGAGCTG ATCGTCATCG TCGCCGGCCG CGGCGAGTTC
GTCGTGGGCT CCGAACGCCA CCCGGTCGCG CCGGGCACCG TCGTCCTGTT CGAGCCGTTC
GAGGCTCACG TCGTGGAGAA CACCGGGGAT CAGGATCTGG TCTTCCTCAC CCAGTACTGG
CGCGACGGCG CCCGCGCGGT GTCCTCGGCC ACCCCGGTGA CCAGCGAGCA CGGCGACCGC
CCGGTGTTCG TCTTCTCGAC GCCGCCCACC CCCAACGGCG ACCTCCACCT CGGCCACCTC
TCCGGCCCGT ATCTGGGTGC CGACGCCTAC GTCCGGTTCC AACGGATGAA CGGCGCCAAC
ATCTGGCACC TGACCGGCAG CGACGACTTC CAGTCCTACG TGGTCGACTG CGCTCGCCGG
GAAGGCAGGT CGAACGCCGA AACGGCCGCG CACTACAGCG CCGAGATCGC GGAAACCCTG
CGACTGATGG ACATCCCGCT CGACCAGTAC ACCGTCACAA ACGCCGACCC CAGCTATGTC
CCCGCGCTGA AGGACTTCTT CACCAGGCTG GTCGACTCCG GCGCGATCGC CCCGAGCGAC
GGCCCCGCGC TGTTCGACCC GAAAACCGGC CAATACCTCT ACGAGGTCGA CGTCCGCGGC
GGCTGCCCCG GCTGCGGTGA GATCACCGGC GGCAACATCT GCGAGGAGTG CGGCGAGCCG
AACACCGTGG TCGACCTGGC CGATCCGGTC GCCAAGCCCT CCGGCGAGGC ACCCGCTGCC
GGCACGGTCC GCCGCTACGT GCTGCCGCTG CATGAGCACG CGGGCACGGT GCTCGACCAT
CACCGCCGGG GCCGCGTCCC GGCCCGGCTA CGGGAGCTCG CCGCACGACT GTTCCGCCGG
GAGCGGGTCG ACATCCCGGT CAGCCACCCC AGCGACTGGG GCATCACCCC GCACGAGGCG
AACGGCGCCG GCCAGGTGAT CTGGGTATGG CCGGAGATGG CCTTCGGCTT CCTGCACGGC
ATCCAGAAGC TCGGCGAGCG CATCGGCCGC GACTGGACGG CCGCCGAGCC GACCGACGAC
TGGAAGATCG TCCACTTCTT CGGCTACGAC AACAGCTTCT ACCACGCGAT TCTCTACCCG
GTGCTCTACC AGCTCGCCCT GCCCGGCTGG ACGCCGGACA TCGACTACCA CGTCAACGAG
TTCTTCCTCT ACGACGGCCT GAAGTTCTCC ACCGGCCGCC GGCACGCCAT CTGGGGCAAG
CAGATCCTCG ACGCCGGCAG CGTGGACGCC GTGCGCTACT TCCTCGCCCG TAGCCGTCCC
GAGGCGCAGC GAACGAACTT CGAGCTCGAC GCCTACGAGC ACACGCTCGC GACCACCCTG
ATCGGCACCT GGCAGGCCTG GCTGAACGAC CTCGGCCAGC ACGTGGCCGA CCACTACGAC
GGGGTGGCTC CCGACGCCGG CAACTGGACC CCCGAGCACG CCGGGTTCCT CAGCCAGCTC
GCTGCCCGGC TTGGGGCGCT CACCGCCAGC CTGCGGCCCG GCGGGTTCTC GCTCAACCAG
GCCGCCGCCG AACTGGACGC CCTGGTGGCC GACGCGCTCC GGTTCAGCCG CCGGGAACGC
GTGCTGGCGC GGGCCGGCGG CATGCCGAAC GAGGTGCGCA CGGCCACCGC ACTGGAGCTG
GCCGCCGCCG CACTGCTCGC GCACGGCGCC GCGCCGGTCA TGCCGCGCTT CGCCGTCCGG
CTGGCCGAAG CCCTTGGCCA GCCGGCGCCC GACCAGTGGC CCAGCACGGT CGAGCTGATC
CCGCCGGGCA GCAAGGTCAC CCTCGCCCAC ACCACGTTCT TCCGCCCGAC CAGCAGGAGC
CTGTCATGA
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| Protein sequence | MIIDRFGVAA LSEAFGIDMV SVDGLGTGAA WGRVAPGVAS AHHRHDETEL IVIVAGRGEF
VVGSERHPVA PGTVVLFEPF EAHVVENTGD QDLVFLTQYW RDGARAVSSA TPVTSEHGDR
PVFVFSTPPT PNGDLHLGHL SGPYLGADAY VRFQRMNGAN IWHLTGSDDF QSYVVDCARR
EGRSNAETAA HYSAEIAETL RLMDIPLDQY TVTNADPSYV PALKDFFTRL VDSGAIAPSD
GPALFDPKTG QYLYEVDVRG GCPGCGEITG GNICEECGEP NTVVDLADPV AKPSGEAPAA
GTVRRYVLPL HEHAGTVLDH HRRGRVPARL RELAARLFRR ERVDIPVSHP SDWGITPHEA
NGAGQVIWVW PEMAFGFLHG IQKLGERIGR DWTAAEPTDD WKIVHFFGYD NSFYHAILYP
VLYQLALPGW TPDIDYHVNE FFLYDGLKFS TGRRHAIWGK QILDAGSVDA VRYFLARSRP
EAQRTNFELD AYEHTLATTL IGTWQAWLND LGQHVADHYD GVAPDAGNWT PEHAGFLSQL
AARLGALTAS LRPGGFSLNQ AAAELDALVA DALRFSRRER VLARAGGMPN EVRTATALEL
AAAALLAHGA APVMPRFAVR LAEALGQPAP DQWPSTVELI PPGSKVTLAH TTFFRPTSRS
LS
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