| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3259 |
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| Symbol | |
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| ID | 3904430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3862655 |
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| End bp | 3863647 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637880584 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_482345 |
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| Protein GI | 86741945 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4124] Beta-mannanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGGC GGTCTGCCGT CTGCCTGATG ATGGCGGCGA GCGTACTGGT TTTCGCCTGC
AGCTCCCCCG GCGACGGCCC GTCGCTGAAA CCCGCATCCC CGAGCGGCGC CGCCCGCGGC
GGCTCGGCTC CGCCGCGGGC GGCCGTCGAA ACCGTGTTCA GGACCCGTCC GCAGTTCGGC
GTCACGGTGC CCGGCATCAG CCAGGCGTCG CTGGGCGAGG TTGCACGCAC GACGGCCTGC
CCGCCGGCGA TGGCCCAGTT CTTCGTCTCC GTGACCCACG GCCTGGACCC GACGGTACTC
GGCGCGGTGC CGGTGACACC GATCGTGACG GTCGAGCCGT GGAACCCGGA CAAGGGGGTC
AACCAGAGCG ACTTCACGCT CGACAAGACC ATCGAGGGCC GGTGGGATGA CCACTACCGG
GCCATCGCGA TGGTAGTGAA GAAGTACGGA CGCCCCGTCC TGATCCGGTT CGCCCACGAG
ATGAACGGCT ACTGGTACCC GTGGGCGTCG GTCGGCTCGA ACACCCCGGC GCTGTTCGTG
GCGGCGTGGC AGCACGTGGT CGGCATCTTC CGAGACGCCG GCGTCACGAA CGCGCTGTGG
GTGTGGTCGC CGAACGTGCT CCGCGGGACG TCGGGAACGC CGCTGGCCGA GTACTACCCC
GGCGACAAGT GGGTCGACCT GATGGGTCTG ACAGGGTACG GCGTGCAGGA GAGCTCCGCC
GCGCAGACGT ACGGCCCGTC CATGGCCCAA CTGGCCGCGC TGTCGACCAA GCCGGTCCTG
CTGACCGAGG TGGGCGCCCA GCGGGACCAG TACAAGACCA GCTGGATCGC CTCGTTCGGC
AGTTGGCTGC AGAGCCACCC CCAGGTGGTG GGGTTCGTCT GGACGGCGAT GAACATCAAG
GACGGCGTGA AGGGTGACTG GCGGTACGAC GACTCGGAGG CCGACCTCGC CGCCTTCCGG
GCGAGCCTGC TCGCCGGGAG GGTCGCCTGC TGA
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| Protein sequence | MRRRSAVCLM MAASVLVFAC SSPGDGPSLK PASPSGAARG GSAPPRAAVE TVFRTRPQFG
VTVPGISQAS LGEVARTTAC PPAMAQFFVS VTHGLDPTVL GAVPVTPIVT VEPWNPDKGV
NQSDFTLDKT IEGRWDDHYR AIAMVVKKYG RPVLIRFAHE MNGYWYPWAS VGSNTPALFV
AAWQHVVGIF RDAGVTNALW VWSPNVLRGT SGTPLAEYYP GDKWVDLMGL TGYGVQESSA
AQTYGPSMAQ LAALSTKPVL LTEVGAQRDQ YKTSWIASFG SWLQSHPQVV GFVWTAMNIK
DGVKGDWRYD DSEADLAAFR ASLLAGRVAC
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