Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3254 |
Symbol | |
ID | 3904425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3853486 |
End bp | 3854070 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880579 |
Product | putative transcriptional regulator |
Protein accession | YP_482340 |
Protein GI | 86741940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.902087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACAG CACGAACACG CCCCGAGGTT CTGCTCGACG ATCTGGTCGA CCTCTTTCTG GCCGAGGGAT TCCGCACTTT CACGCTCGCG CAGCTCGCCG CGCGGCTGCG CTGTTCCAAG ACGACGTTGT ATGCCCTCGG GCAGTCCAAG GAGCAGCTTA CGGTCAACGC GGTGAGGCAC TACTTCCGCC GGGCCACCGC GCAGGTCGAG ACCGAGACCG CCGAAGCCGC GTCCTCGGCC GACCGGCTCG TGGCCTACCT GGCGGCGATC GGTCGCGCGC TGCGTCCGGC ATCGCCCGCG TTCAGGCTCG ACCTCGCCGC GCACCACGTC GCCCGGGAGG TGTATGAGCA CAACATCGCC GCGGCCGCCG CGCGTGTCCG TCAGCTCATC GGCGACGGCG TCGCTGCGGG AGAATTCCGC GATGTTCACG CGGCGTTCAT CGCCGACACG ATCGCCGCGA CGATGGAGCG CATCCAGACC GGTCGCGTCC TTGCCGCCAC CGGCTTACAC GACGCCGATG CCTACGAGGA GCTTGCCTCG CTTGTGCTCG ACGGCATTCG CAGCGTCACC GCAGCCGGAA CCTAG
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Protein sequence | MPTARTRPEV LLDDLVDLFL AEGFRTFTLA QLAARLRCSK TTLYALGQSK EQLTVNAVRH YFRRATAQVE TETAEAASSA DRLVAYLAAI GRALRPASPA FRLDLAAHHV AREVYEHNIA AAAARVRQLI GDGVAAGEFR DVHAAFIADT IAATMERIQT GRVLAATGLH DADAYEELAS LVLDGIRSVT AAGT
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