Gene Francci3_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3254 
Symbol 
ID3904425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3853486 
End bp3854070 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content69% 
IMG OID637880579 
Productputative transcriptional regulator 
Protein accessionYP_482340 
Protein GI86741940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.902087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACAG CACGAACACG CCCCGAGGTT CTGCTCGACG ATCTGGTCGA CCTCTTTCTG 
GCCGAGGGAT TCCGCACTTT CACGCTCGCG CAGCTCGCCG CGCGGCTGCG CTGTTCCAAG
ACGACGTTGT ATGCCCTCGG GCAGTCCAAG GAGCAGCTTA CGGTCAACGC GGTGAGGCAC
TACTTCCGCC GGGCCACCGC GCAGGTCGAG ACCGAGACCG CCGAAGCCGC GTCCTCGGCC
GACCGGCTCG TGGCCTACCT GGCGGCGATC GGTCGCGCGC TGCGTCCGGC ATCGCCCGCG
TTCAGGCTCG ACCTCGCCGC GCACCACGTC GCCCGGGAGG TGTATGAGCA CAACATCGCC
GCGGCCGCCG CGCGTGTCCG TCAGCTCATC GGCGACGGCG TCGCTGCGGG AGAATTCCGC
GATGTTCACG CGGCGTTCAT CGCCGACACG ATCGCCGCGA CGATGGAGCG CATCCAGACC
GGTCGCGTCC TTGCCGCCAC CGGCTTACAC GACGCCGATG CCTACGAGGA GCTTGCCTCG
CTTGTGCTCG ACGGCATTCG CAGCGTCACC GCAGCCGGAA CCTAG
 
Protein sequence
MPTARTRPEV LLDDLVDLFL AEGFRTFTLA QLAARLRCSK TTLYALGQSK EQLTVNAVRH 
YFRRATAQVE TETAEAASSA DRLVAYLAAI GRALRPASPA FRLDLAAHHV AREVYEHNIA
AAAARVRQLI GDGVAAGEFR DVHAAFIADT IAATMERIQT GRVLAATGLH DADAYEELAS
LVLDGIRSVT AAGT