| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3230 |
|---|
| Symbol | |
|---|
| ID | 3906197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3824291 |
|---|
| End bp | 3825376 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637880555 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482316 |
|---|
| Protein GI | 86741916 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2898] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.233684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGTA GCAGCAGCAC AGGGGTCGCA CAGACGCGAT CCGTCGCGGA GCCCACTTTG
GACGTGCTGA CCCGGCACGC TCACAACCCA TCTGCATACC TGGCGCTGAA CGAAGGAAAT
CTGACGTTCG AGGTGGATGG AATCGACGGC GTCGTCATCT ACCGGCCAAG CGGGAGGTTC
CTGATCCAGT TCGGCGGAGT CTTCGCGCCG CCGGACCAGC AGGCTGAGCT GCTGACTGAG
TTCGTCCGTT GGGCCAGGCA GAACCGCCGT CGGGTGATTA GCGTCCAGCT GATGCCCGAA
GATACTGACA TCTACCTGCG TGCCGGTTTT GGCGTGAACC AGCTCGGCGC CTCCTACGCC
CGTTCACTGG ACGGGTTCAG CATGTCGGGG AAACATTTCG TGAAGATCCG GAATAAGATC
TCTCGAGCTA ATCGGGACGG CGTCCGGGTA CGCGAGGTGG CGGCGGTCCG TGAGCGGACG
CCGCAGCTGA TGGAGGCACT GAACGAGGTG GACTGGGTAT GGTTGAAGGC AAAAGGTTTT
GGCGTCGCCG AGATCGACTT TATGATCGGC CAACGGGGCG GTTGGGCCGA GCGCAGGCGC
CGGTTGTTCG TTGCCGAGCA CGCCGGCCGG CTGGTGGGCT ACCAGGTATT CTCGCCGGTC
TTCGGGCGGC ACTCCGGTTG GCTGCATGAC CTGAGCCGGC GGATACCGGA CGCTCCCACC
GGAGTCAGCG AGCTGATCCT GTCCACGGCC GTACGGCAGT TCGTCGGGGA GAAGACGCCG
TACCTGCACT TTGGTCTCAC TCCCTTCACT TCGCTCGATC CGAAACATCG ACTTCCTGGA
CACAGCCCCT TCGTGGACCG TTTCGTGCGC TGGCTCGGCA CTCGCGCCGA GTGGATCTAC
CCCGCCCAGT CCCAGGTGGC ATACAAGCTG AAGTGGCAAC CAGACCTGAT CCAGCCGGAG
TATGTCGCGT TCCAGGACGG CGTCTCGCTC TCCGCCGTCT GGCGGTTGAT GCGGGTGACG
AAGGCCGTCT CGCTGCGCCG GGGCAGGAAG AGCGTCACAC GTCGCCCAGC GAGTCCCCAT
GAGTGA
|
|---|
| Protein sequence | MTRSSSTGVA QTRSVAEPTL DVLTRHAHNP SAYLALNEGN LTFEVDGIDG VVIYRPSGRF
LIQFGGVFAP PDQQAELLTE FVRWARQNRR RVISVQLMPE DTDIYLRAGF GVNQLGASYA
RSLDGFSMSG KHFVKIRNKI SRANRDGVRV REVAAVRERT PQLMEALNEV DWVWLKAKGF
GVAEIDFMIG QRGGWAERRR RLFVAEHAGR LVGYQVFSPV FGRHSGWLHD LSRRIPDAPT
GVSELILSTA VRQFVGEKTP YLHFGLTPFT SLDPKHRLPG HSPFVDRFVR WLGTRAEWIY
PAQSQVAYKL KWQPDLIQPE YVAFQDGVSL SAVWRLMRVT KAVSLRRGRK SVTRRPASPH
E
|
|---|
| |