| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3211 |
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| Symbol | |
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| ID | 3906177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3803540 |
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| End bp | 3804580 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 637880535 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_482297 |
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| Protein GI | 86741897 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.121067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGAGA TCGTTCCCGC CGGCACTACC CCGGCCCGCC GTCGGCCCCC TGAGTGCCGT
CGTCGGCCCA TGGAACCGCC GGCGACCGTC GCGGCCACCG CGCCGCCGTC GGGCCCCACC
CGCGCCGCCG TGCTCGGGGC ACCGGTGGAC CATTCGCTCT CCCCGCTGCT GCATGCCGCC
GCCTACGCCA AGCTCGGTCT CGCGGTGACG TACACCGCCG TGCACTGCGA CGAGACCGGG
CTCGCCGCGA TGCTCACCCG GGTCCGCACG GATCCGGGCT GGGTCGGGCT GTCCCTGACC
ATGCCGCTCA AGACCGTCGC GCTCGACCTG CTCGACGAGG TGGACGCGAC GGCGGCGGTC
ATCGGCGCCG TCAACACGGT CGTCGTCGGG CCCGCCGGCC GGTTGCGTGG CTACAACACC
GACGTGGACG GCATCGGCAT GGCGCTGCGC CGGGTGATGC GCGGCGCGGT CCCAGGCCAG
CCGCTCGTAC TCGGTGCCGG TGGCACGGCC CGCGCCGCGG TCGCGGCGGT CGCCGCGGCG
GGCTGCACCC GCCTCGGCGT CGTCGCCCGC CGGCCCGCCG CCGTGGCGGA GGTGGCGGAG
ATCGGGTCGC GGCTGGGCGT CGAGGTCACC GCGCTGCCCT GGGAGCTGCT GGCCGCGGGC
CTGCCTGCCG GTCCGGATCT GGTCATCTCC ACCACGCCCG CCGGCGCGAC CGACGGGCTC
GCCACCGGAC CGTGGCCGCC AGCCTGCCAG CTCGTAGAAC TGCTCTATCA TCCCTGGCCC
ACGGCGCTGG CCGCCGCGGC CTACCGGGCC GGTGCCCGGG TCGCAGGTGG CCTGGAGATC
CTCGCCGCCC AGGCCGTGGG GCAGGTCGAG CACTTCACCG GGCAGGTGGT TCCCACCAGC
GTTCTGCTGG CCGCGGGTCA GGCCGCGCTG GACGAGCGGA CGCGGGGGAA CAGGCCCCCG
GCGGTGGAGG TCGGCGTGCC GGGCGGCCAC GGTCTCGCGG GGAGCGGTCC CCGCGGCCGC
GGTGGACCTG CCGGCGGATA G
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| Protein sequence | MPEIVPAGTT PARRRPPECR RRPMEPPATV AATAPPSGPT RAAVLGAPVD HSLSPLLHAA
AYAKLGLAVT YTAVHCDETG LAAMLTRVRT DPGWVGLSLT MPLKTVALDL LDEVDATAAV
IGAVNTVVVG PAGRLRGYNT DVDGIGMALR RVMRGAVPGQ PLVLGAGGTA RAAVAAVAAA
GCTRLGVVAR RPAAVAEVAE IGSRLGVEVT ALPWELLAAG LPAGPDLVIS TTPAGATDGL
ATGPWPPACQ LVELLYHPWP TALAAAAYRA GARVAGGLEI LAAQAVGQVE HFTGQVVPTS
VLLAAGQAAL DERTRGNRPP AVEVGVPGGH GLAGSGPRGR GGPAGG
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