| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3204 |
|---|
| Symbol | |
|---|
| ID | 3906170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3797843 |
|---|
| End bp | 3798340 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637880528 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_482290 |
|---|
| Protein GI | 86741890 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.139411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACT ATGCGAAGGC GCTCGGTGCT CGGCTGCGCG CGATACGCAC CCAGCAGGGG
CTCTCGCTTC ATGGCGTCGA GGAGAAGTCG CACGGTCGGT GGAAAGCCGT CGTCGTGGGT
TCCTACGAAC GTGGGGACCG CGCCGTCACC GTGCAGCGCC TCTCCGAGCT CGCGGAGTTC
TACGGCGTTC CGGTGGGGGA GCTTCTTCCC GAGGGTTCCA CCGTCGCTCC GCTGGAGCAG
TCTCCTCGGA TCGTTCTCGA CCTCGAGCGT CTCTCCCAGG TTCCCAAGGA GCAGGGTGGT
CCGCTCGCCC GGTACGCGGC GACCATTCAG AGCCAGCGCG GCGACTACAA CGGCCGGGTG
CTCTCGATCC GGTACGAGGA CCTGCGCTCG CTCGCGGTGA TCTACGACAC CTCGCCGAGC
AAGCTCACCG AGCAGCTCGT CTCTTGGGGC GTGCTGTCTC CGGAGCAGGG CGCGGACGCC
GCGGCGACCG ACGTCTAG
|
|---|
| Protein sequence | MSDYAKALGA RLRAIRTQQG LSLHGVEEKS HGRWKAVVVG SYERGDRAVT VQRLSELAEF
YGVPVGELLP EGSTVAPLEQ SPRIVLDLER LSQVPKEQGG PLARYAATIQ SQRGDYNGRV
LSIRYEDLRS LAVIYDTSPS KLTEQLVSWG VLSPEQGADA AATDV
|
|---|
| |