| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3195 |
|---|
| Symbol | gmk |
|---|
| ID | 3906161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3786594 |
|---|
| End bp | 3787148 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637880519 |
|---|
| Product | guanylate kinase |
|---|
| Protein accession | YP_482281 |
|---|
| Protein GI | 86741881 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0194] Guanylate kinase |
|---|
| TIGRFAM ID | [TIGR03263] guanylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0922592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGCCCA TGGGTCTTAC AGTGCTGTCC GGGCCGTCCG GAGTCGGGAA GGACACCGTC
GTCGCGGCAG TCCGGGAACG TCACCCCGAG GTCTGGGTCT CGGTCAGCGC CACCACGCGG
CCACCGCGTC CGGGTGAGAC TGACGGTGTC GAGTACCACT TCGTCGACGC CGAGGAGTTC
GCCCGGATGG TCAAGGCCGG GGAGTTCGTC GAGCACGCGA TGTTTGCCGG ACACGCCTAC
GGCACCCCCC GCCGTCCGCT TCTCGAAAGG CTCGCCGCGG GTGTGCCCTG CCTGCTGGAG
ATCGAGCTGC TGGGCGCCCG GCAGGTGCGC TCGGCGATGC CACAGGCCCG TTTCGTCTTC
CTCGCCCCGC CCACCTTCGA CGAGCTCGTC CGTCGGCTGA CCGGTCGGGG GACCGAGTCA
CCCGAGGTCA TCGCCCGCAG GCTGGACCGG GCGCGCATCG AACTCGCGGC CGAGACGGAG
TTCGACGACG TGATCGTGAA CGACGACGTG CGGTCCGCGG CAGCCCGCTT GGTAGCATTG
ATGATCGGCT CGTAG
|
|---|
| Protein sequence | MVPMGLTVLS GPSGVGKDTV VAAVRERHPE VWVSVSATTR PPRPGETDGV EYHFVDAEEF
ARMVKAGEFV EHAMFAGHAY GTPRRPLLER LAAGVPCLLE IELLGARQVR SAMPQARFVF
LAPPTFDELV RRLTGRGTES PEVIARRLDR ARIELAAETE FDDVIVNDDV RSAAARLVAL
MIGS
|
|---|
| |