Gene Francci3_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3159 
SymbolppnK 
ID3903956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3739030 
End bp3739929 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID637880480 
Productinorganic polyphosphate/ATP-NAD kinase 
Protein accessionYP_482245 
Protein GI86741845 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0362338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.433163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGG AGATCCTCGT CGTCACCCAT CCCCGCCGCT CGGTGGTCCG GGAGAGCGCC 
CATCGGGTCA TCGAGGGCCT GGCCGCCGCC GGGGTGTCGC CGCGGGTGCT GCGGGACGAG
GCGGAGATGC TCGACCTGAC CGCCGCCAAC AGCGTGCCGC ACGACGCCGA CGCGGCCGTC
GGGGTGGAAC TGGTGCTGGT CCTCGGCGGC GACGGCAGCC TGCTGCGCGG CGCGGAGCTG
GCCCGCACCG CTGACGCCCC GCTGCTGGGC GTGAACCTCG GGCATGTCGG GTTCCTCGCC
GAGGCCGAAC CCGACGCGCT GGAATCCACC ATCGAGCACG TCGTCCGCAA GGACTACACG
GTCGAGGAAC GCATGACGGT AGACGTCACG GTCCGGCGGC GTGGCGAGGT CACCTATACC
GGCTGGGCGC TCAACGAGAT GTCCCTGGAG AAGGCCGAGC GCGCTCGGAT GCTGGAATGC
GTGTTGGAGA TTGACGGGCG TCCGCTGTCC CGGTGGGGCT GCGACGGGGT GATCTGTTCG
ACGCCCACCG GATCCACCGC CTACGCCTTC TCGGTCGGTG GTCCGGTGAT GTGGCCGGGC
GTCGAGGCCC TGCTGGTCGC CCCGATCAGC GCGCACGCGC TGTTCGCCCG GCCGCTCGTG
CTGGCGCCGA CCTCCGCGGT CGCCGTGGAG ATCCTGCCGC CGGTGCCCGC GGTCCTCTAC
TGTGACGGCC GGCGGTCCGT CGAGGTGCCC CCCGAGTCGC GGGTCGAGGT GGTCCGCGGC
CGCCGACCGG TGCGGCTCGC CGTGGTGCAC CCGCTGCCGT TCACTGATCG TCTTGTTGCC
AAGTTCGGCC TTCCGGTGGA AGGTTGGCGG GGACGCAACC AGCGTGCCTC CCCCGCGTAG
 
Protein sequence
MTREILVVTH PRRSVVRESA HRVIEGLAAA GVSPRVLRDE AEMLDLTAAN SVPHDADAAV 
GVELVLVLGG DGSLLRGAEL ARTADAPLLG VNLGHVGFLA EAEPDALEST IEHVVRKDYT
VEERMTVDVT VRRRGEVTYT GWALNEMSLE KAERARMLEC VLEIDGRPLS RWGCDGVICS
TPTGSTAYAF SVGGPVMWPG VEALLVAPIS AHALFARPLV LAPTSAVAVE ILPPVPAVLY
CDGRRSVEVP PESRVEVVRG RRPVRLAVVH PLPFTDRLVA KFGLPVEGWR GRNQRASPA