Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3159 |
Symbol | ppnK |
ID | 3903956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3739030 |
End bp | 3739929 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880480 |
Product | inorganic polyphosphate/ATP-NAD kinase |
Protein accession | YP_482245 |
Protein GI | 86741845 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0061] Predicted sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0362338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.433163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGGG AGATCCTCGT CGTCACCCAT CCCCGCCGCT CGGTGGTCCG GGAGAGCGCC CATCGGGTCA TCGAGGGCCT GGCCGCCGCC GGGGTGTCGC CGCGGGTGCT GCGGGACGAG GCGGAGATGC TCGACCTGAC CGCCGCCAAC AGCGTGCCGC ACGACGCCGA CGCGGCCGTC GGGGTGGAAC TGGTGCTGGT CCTCGGCGGC GACGGCAGCC TGCTGCGCGG CGCGGAGCTG GCCCGCACCG CTGACGCCCC GCTGCTGGGC GTGAACCTCG GGCATGTCGG GTTCCTCGCC GAGGCCGAAC CCGACGCGCT GGAATCCACC ATCGAGCACG TCGTCCGCAA GGACTACACG GTCGAGGAAC GCATGACGGT AGACGTCACG GTCCGGCGGC GTGGCGAGGT CACCTATACC GGCTGGGCGC TCAACGAGAT GTCCCTGGAG AAGGCCGAGC GCGCTCGGAT GCTGGAATGC GTGTTGGAGA TTGACGGGCG TCCGCTGTCC CGGTGGGGCT GCGACGGGGT GATCTGTTCG ACGCCCACCG GATCCACCGC CTACGCCTTC TCGGTCGGTG GTCCGGTGAT GTGGCCGGGC GTCGAGGCCC TGCTGGTCGC CCCGATCAGC GCGCACGCGC TGTTCGCCCG GCCGCTCGTG CTGGCGCCGA CCTCCGCGGT CGCCGTGGAG ATCCTGCCGC CGGTGCCCGC GGTCCTCTAC TGTGACGGCC GGCGGTCCGT CGAGGTGCCC CCCGAGTCGC GGGTCGAGGT GGTCCGCGGC CGCCGACCGG TGCGGCTCGC CGTGGTGCAC CCGCTGCCGT TCACTGATCG TCTTGTTGCC AAGTTCGGCC TTCCGGTGGA AGGTTGGCGG GGACGCAACC AGCGTGCCTC CCCCGCGTAG
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Protein sequence | MTREILVVTH PRRSVVRESA HRVIEGLAAA GVSPRVLRDE AEMLDLTAAN SVPHDADAAV GVELVLVLGG DGSLLRGAEL ARTADAPLLG VNLGHVGFLA EAEPDALEST IEHVVRKDYT VEERMTVDVT VRRRGEVTYT GWALNEMSLE KAERARMLEC VLEIDGRPLS RWGCDGVICS TPTGSTAYAF SVGGPVMWPG VEALLVAPIS AHALFARPLV LAPTSAVAVE ILPPVPAVLY CDGRRSVEVP PESRVEVVRG RRPVRLAVVH PLPFTDRLVA KFGLPVEGWR GRNQRASPA
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