| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3110 |
|---|
| Symbol | |
|---|
| ID | 3904236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3683212 |
|---|
| End bp | 3683808 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637880431 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482196 |
|---|
| Protein GI | 86741796 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.181595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.207349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCTGA CCATCGCCGA CATCACCACC GACCACCAGG CGTACGCGGA GCGCCGGCTG
CGGCTGCGCA GCCAGATGAT CCTGGTGCGC GCCGAACGCC GGGTACGGGT CGGGGACATC
GTCGTCCTCG AGTTCGAAAA CGAGCAGACG CTGCGCTACC AGGTGCAGGA GATGGTCTAC
ACCGAGCGGT TGACCGCCTC CGCCGACGTC GCCCACGAGA TCGATGCCTA CTCCCGCCTG
CTACCCTCCA GCCACGTCCT CACGGCGACG GTGTTCATCG AGCTCTCGGT TCTGGAGACC
GTCCGCGAGG AGTTGGGGCG GCTTGCCGGG CTGCAGCACA GTCTCGCCCT GGAGATCGGC
GGAATCCGGG TGGCGGGCGA GGAGATCCCC GGCCTTGACG AGGATCCCGA CATGCCCACC
GAGACCGTCT CCGTGCACAT GGTGCGCTTC GCGCTGACCG ATTCGCTCCG GGACGCCTTC
CGCGACCCCG GCGTGCCGGT CGAGCTTGTC GTGGAACACC CGGAGTACAG CGAGGCGACG
CCGTTGACCG GAGCTACCCG GCGTGTCCTC ATCGCGGATC TCGCGTTGCG GTCCTGA
|
|---|
| Protein sequence | MALTIADITT DHQAYAERRL RLRSQMILVR AERRVRVGDI VVLEFENEQT LRYQVQEMVY
TERLTASADV AHEIDAYSRL LPSSHVLTAT VFIELSVLET VREELGRLAG LQHSLALEIG
GIRVAGEEIP GLDEDPDMPT ETVSVHMVRF ALTDSLRDAF RDPGVPVELV VEHPEYSEAT
PLTGATRRVL IADLALRS
|
|---|
| |