Gene Francci3_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3102 
Symbol 
ID3904228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3674701 
End bp3675096 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content69% 
IMG OID637880423 
Producthistidine triad (HIT) protein 
Protein accessionYP_482188 
Protein GI86741788 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.550311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.852173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCG TCTTCACCCG GATCATCAAC GGCGAGCTTC CCGGTCGCAT CGTCTACTCC 
GACGAGCATG TGGTGGCGTT CCTGACGATC GCGCCGATCC GGCCGGGACA CACCCTGGTT
GTTCCCCGCA CCGAGATCGA CCACTGGATC GATCTACCCG ATGACCTCCA GACCGCGCTG
TGGAGCGCCG CGGCGACGGT GGGCCGCGCC ATCGACGCGG CCTTCCGACC TCGGCGGGTG
GCCGCGCTCG TCGCCGGGCT GGAGGTCCCG CACGTCCACG TGCATCTCCT GCCGATCGAG
GACGAGACGC AGATCGACTT CAGGCTCGCC GACCACAACC CCGACTCGGC CGAGCTCGAT
GCCGTGGCCG AGCGGATCCG CGCCGCCCTC GGCTGA
 
Protein sequence
MPSVFTRIIN GELPGRIVYS DEHVVAFLTI APIRPGHTLV VPRTEIDHWI DLPDDLQTAL 
WSAAATVGRA IDAAFRPRRV AALVAGLEVP HVHVHLLPIE DETQIDFRLA DHNPDSAELD
AVAERIRAAL G