Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3102 |
Symbol | |
ID | 3904228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3674701 |
End bp | 3675096 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880423 |
Product | histidine triad (HIT) protein |
Protein accession | YP_482188 |
Protein GI | 86741788 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.550311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.852173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGCG TCTTCACCCG GATCATCAAC GGCGAGCTTC CCGGTCGCAT CGTCTACTCC GACGAGCATG TGGTGGCGTT CCTGACGATC GCGCCGATCC GGCCGGGACA CACCCTGGTT GTTCCCCGCA CCGAGATCGA CCACTGGATC GATCTACCCG ATGACCTCCA GACCGCGCTG TGGAGCGCCG CGGCGACGGT GGGCCGCGCC ATCGACGCGG CCTTCCGACC TCGGCGGGTG GCCGCGCTCG TCGCCGGGCT GGAGGTCCCG CACGTCCACG TGCATCTCCT GCCGATCGAG GACGAGACGC AGATCGACTT CAGGCTCGCC GACCACAACC CCGACTCGGC CGAGCTCGAT GCCGTGGCCG AGCGGATCCG CGCCGCCCTC GGCTGA
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Protein sequence | MPSVFTRIIN GELPGRIVYS DEHVVAFLTI APIRPGHTLV VPRTEIDHWI DLPDDLQTAL WSAAATVGRA IDAAFRPRRV AALVAGLEVP HVHVHLLPIE DETQIDFRLA DHNPDSAELD AVAERIRAAL G
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