Gene Francci3_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3071 
Symbol 
ID3904272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3638942 
End bp3639199 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content72% 
IMG OID637880392 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_482157 
Protein GI86741757 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGATC GTCCGCCGCA CTTGCACCCG CGTGCGCACC CGGAGCCGCT CGCCCGGGCG 
CGGGTCGTCG TCAATGGTGC GCCGCGGGGC ATCCCGGGTG GCCAGCCGCT GCCCGACCTG
CTCGCCGAGC TGGGCCTGCC GTCTGGTTCG GTGGTGGTCG AGCACAATGG CGTGGCTCTG
ACGCCGTCCG AGATTCCCGC CGTCCGGCTC GCCGACGGCG ACATTTTGGA GATCGTGCGT
GCTGTCGCCG GAGGTTGA
 
Protein sequence
MVDRPPHLHP RAHPEPLARA RVVVNGAPRG IPGGQPLPDL LAELGLPSGS VVVEHNGVAL 
TPSEIPAVRL ADGDILEIVR AVAGG