Gene Francci3_3047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3047 
Symbol 
ID3904400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3614741 
End bp3615202 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content71% 
IMG OID637880367 
Productradical SAM family protein 
Protein accessionYP_482133 
Protein GI86741733 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG TTGCTGAGGC CCCGACGTTC TTATGGCTGG AGATCACCGG CCGGTGCCAG 
CTCGCATGCG GCCACTGCTA CGCGGACTCG TCGCCGCTCG GGGACCACGG GACGATGAGT
GCGGCCGACT GGCGTGCGGT GATCGACGCC GCGGCCGAGC TCGGTGTGGG GATGGTGCAG
CTGATCGGAG GGGAACCGAC GCTGCACCCC GGCCTGGCCG GCCTGGTCGG CCATGCGCTG
GCCGCCGGAC TACAGGTGGA GATCTACACG AACCTGCTGC ACGTCACGGC CGCCCTGTGG
AAGGTCTTCA CCCTGCCCGG GGTGCGGCTG GCGACCAGCT ACACTACGCG GCCGACCCAG
CCGGCCATGA GACGGTCACG GGCCGGCCGG GCTCGCATGC CCGGACCCGC GCGAACATCG
CCGAAGCGGT CCGCCGCTCG GTACCGCTGC GTGTCGGCCT GA
 
Protein sequence
MTVVAEAPTF LWLEITGRCQ LACGHCYADS SPLGDHGTMS AADWRAVIDA AAELGVGMVQ 
LIGGEPTLHP GLAGLVGHAL AAGLQVEIYT NLLHVTAALW KVFTLPGVRL ATSYTTRPTQ
PAMRRSRAGR ARMPGPARTS PKRSAARYRC VSA