Gene Francci3_3031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3031 
Symbol 
ID3904384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3598362 
End bp3599120 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID637880351 
ProductO-methyltransferase family protein 
Protein accessionYP_482117 
Protein GI86741717 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.402692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA GTCCGGCACA GAAGATTCGT GAAGTCGCGA CAACCGGCGT CGGCACGCTT 
CGCCGCGAAG GCGCAAAAAA CGGCAAGGGA TTGAAATCAG CCTATCTGGC CGATCCGATC
CACAGCTATC TGACGGAGCA CAGCTCACCT CCGGATCCGA TCCTCGACGC GCTCTCCGCC
GTGACGGCGA CGCTCCCCGA GGCGGAGATG CAGGTACCGG CCGAGCAGGG GACGTTCCTG
ACCATCCTGA CGGCCTCGAT CGCCCCGCGC CGCGCGGTCG AGATCGGTAC CTTCACCGGC
TATTCCGCGC TGTGCATCGC ACGGGGTCTG CCCCCCGGCG GCCGACTTCT CTGCCTGGAC
ATCAGCGCGG AATGGACCTC GATCGCCCGC CAGTACTGGG CTCGGGCCGG TGTTTCCGAT
CACATCGACC TCGCCCTCGG ACCGGCGGCG GACAGTCTCG GCATGCTCCC CGAAGAACCC
ACCTTCGACC TGGCGTTCAT CGACGCGGAC AAGACCTCGT ATAGGAGGTA TTACGAGCTT
CTCTTTCCCC GGATGAACCC GAACGGGGTC ATCATCGTCG ATAATGTGCT GCAGTATGGG
CACGTGGTGC GCTCCCACTC GGACAATCCT GCTGTCGTCG CCGTCAAACA GTTCAACGAG
CTTCTCGCCG GCGACTCCCG GGTACAGGTT GTCATGCTGC CCATTGCGGA CGGACTGACC
ATCGTCCGGA AACTGCCCTC GCCGCGGACA CCCGTATAG
 
Protein sequence
MAKSPAQKIR EVATTGVGTL RREGAKNGKG LKSAYLADPI HSYLTEHSSP PDPILDALSA 
VTATLPEAEM QVPAEQGTFL TILTASIAPR RAVEIGTFTG YSALCIARGL PPGGRLLCLD
ISAEWTSIAR QYWARAGVSD HIDLALGPAA DSLGMLPEEP TFDLAFIDAD KTSYRRYYEL
LFPRMNPNGV IIVDNVLQYG HVVRSHSDNP AVVAVKQFNE LLAGDSRVQV VMLPIADGLT
IVRKLPSPRT PV