| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3027 |
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| Symbol | hisD |
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| ID | 3904380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3592383 |
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| End bp | 3593678 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637880347 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_482113 |
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| Protein GI | 86741713 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0409486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAGAA GGCTTGATCT GCGTGGCGCG GTGCCTGCCG CAGCCGAGAT CCGACGGCTA
CTGCCGCGGG CCGACGTCGA CGTCGACGTC GCCGTCGATG CGGTCCGGCC GGTCTGTGCG
GACGTGCGGG ACCGCGGCGA CGCGGCCGTC CTCGCCGCCG CGGAGCGGTT CGACGGGGTC
CGCCCGCCGA GCCTGCGGGT GCCCGCCCAG GTTCTCGCCG CCGCCGCGGA TGTCCTGGAT
CCGGCCGTGC GCGACGCGCT GACCGAGGCG ATCCGCCGGA CTCGGCTGGT GCACCGTGCG
CAGCTGCGGG AGCCGGTGGC GATCGAGGTC GCGCCCGGCA CCACGGTGAC GCAGCGCTGG
GTGCCGGTGG AGCGGGTCGG CCTGTACGTG CCGGGCGGGC GGGTCGCCTA CCCCAGCAGC
GTCGTGATGA ACGTCGTGCC CGCCCAGGAG GCCGGGGTCG GCTCGCTCGC GGTCTTCTCC
CCGCCGCAGA AGGACAACGG CGGGCTGCCG CATCCGGTGA TCCTCGCCGC CTGCGCGCTG
CTCGGTGTCG AGGAGGTCTA CGCGGCCGGC GGAGCCCAGG CCGTGGCGAT GGCCGCCTAC
GGGACCACGA GCTGCCCGCC GGTCGATGTG ATCACCGGGC CCGGCAACGT CTACGTCACG
GCGGCCAAGC GCCTGCTGCG TGGGGTCGTC GGGGTGGACG CCGAGGCGGG CCCGACCGAG
GTCGCGATCC TCGCCGACGC CACCGCGGAT CCGGCCTTCG TCGCAGCCGA CCTCATCGCC
CAGGCCGAGC ACGACCCGAT GGCCGCCTGC CTGCTGATCA CCCCGTCGGT GGAACTCGCC
GACGCGGTCG ACGTCGAGCT CGGCAAGCAG GTGCCCGCCA CCCGCCACCG GGAGCGGGTG
GCGGAGTCGC TCGCCGGCCA GGGGGCGGTC GCGCTCGTCG CGGACGTCGA CGCGGGTCTC
GCGGTGGCGG ACGGCTGGGC CGCCGAGCAT CTGGAGATCC ACACCGCGGA CGCCGCCGCG
GTCGCCGCCC GGGTGCGCCA CGCCGGAGCG GTCTTCGTCG GCGACTACGC TCCCGTCCCG
CTCGGCGACT ACCTGGCCGG GTCCAACCAC GTCCTGCCCA CCGGCGGCAC CGCCCGGCAT
TCCAGCGGTC TGGCGGTCAC CGCCTTCCAA CGTCAGGTCC AGGTGGTCGA GTGCACGCGG
GAGGGGCTCG CCGCCGTCGC CCCGCGTATC GCCGCGCTCG GCGGGGCGGA GGACCTCACA
GCTCACGTCG ACGCGGTGGA GGTTCGACTC CGATGA
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| Protein sequence | MLRRLDLRGA VPAAAEIRRL LPRADVDVDV AVDAVRPVCA DVRDRGDAAV LAAAERFDGV
RPPSLRVPAQ VLAAAADVLD PAVRDALTEA IRRTRLVHRA QLREPVAIEV APGTTVTQRW
VPVERVGLYV PGGRVAYPSS VVMNVVPAQE AGVGSLAVFS PPQKDNGGLP HPVILAACAL
LGVEEVYAAG GAQAVAMAAY GTTSCPPVDV ITGPGNVYVT AAKRLLRGVV GVDAEAGPTE
VAILADATAD PAFVAADLIA QAEHDPMAAC LLITPSVELA DAVDVELGKQ VPATRHRERV
AESLAGQGAV ALVADVDAGL AVADGWAAEH LEIHTADAAA VAARVRHAGA VFVGDYAPVP
LGDYLAGSNH VLPTGGTARH SSGLAVTAFQ RQVQVVECTR EGLAAVAPRI AALGGAEDLT
AHVDAVEVRL R
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