Gene Francci3_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2942 
Symbol 
ID3903757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3475595 
End bp3476494 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content73% 
IMG OID637880263 
ProductADP-ribosylation/crystallin J1 
Protein accessionYP_482029 
Protein GI86741629 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.220278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCT TTACCGTGGA GGGTCTGATC CGGGCCTCGG TCCGCAGCCG TTCCCGGGGC 
ATCGCCGATC CGCCCGCGGT GCTGTGGCGC GCCTACCAGC GTTGGCTCAC GACGCAGCGG
CGGACCGGTC CGGCCGCCGG GGAGGTGGAC GGCTGGTTGG CGGCGCAGCA GCTGATGTAT
GCCCGGCGCG CTCCGGGGAA CGCCTGCCTG TCCGGGCTGG GGCGCCCCGA GATGGGCACG
CTCGCGCGGC CGGCGAACCC CGACAGCAAG GGATGCGGGG CGGTGATGCG CTCGGCCCCG
TTCGGGCTGC TCCGGCGGGG CCCGGAAACC TCCTTCGACC ATGCGGTCGC ATGCGCCGTG
TTCACCCACG GTCATCCCTC CGGGTACCTC GCCGCGGGCG CGTTCGCATG GATCGTCGCC
GCGATGGTAG ACGGCGCTGG CATCACCCAG GCCACCGCAT CGGCCCTCGG CCGCCTGTCG
GCCGAACGCG ACGGCAAGGA AGTAGCCAGA GCTCTGCGGG CGGCGCTCGG AACGGCAGCG
GACGGTGCGC CCACGGCGGA ACGCGTGGAA TCGCTGGGCG CCGGCTGGGT CGCCGAGGAG
GCGCTAGCGA TCGCGGTGTA CTGCGCGGTG GCGGCGCCCG ACGATCCGCA GACGGCGCTG
CTCGCGGCAG TCAACCACTC CGGCGACAGC GACTCGACCG GCGCGATCTG CGGGAACCTC
GTTGGCGCCG CTCTGGGTGA GCCGGCGCTG CCGGCAGCCT GGCTGAAGGA GCTGGCGGGC
TATGAGCTGG TCGGGCAGGT CGCGGACGAT CTGGTAACCG AGATCGAGAA CACCGCGACC
GTCTCCGACG CCTTCGGCGC GGCCACCCCG GCCTGGTCCA CCCGCTACCC CGGGAGCTGA
 
Protein sequence
MTLFTVEGLI RASVRSRSRG IADPPAVLWR AYQRWLTTQR RTGPAAGEVD GWLAAQQLMY 
ARRAPGNACL SGLGRPEMGT LARPANPDSK GCGAVMRSAP FGLLRRGPET SFDHAVACAV
FTHGHPSGYL AAGAFAWIVA AMVDGAGITQ ATASALGRLS AERDGKEVAR ALRAALGTAA
DGAPTAERVE SLGAGWVAEE ALAIAVYCAV AAPDDPQTAL LAAVNHSGDS DSTGAICGNL
VGAALGEPAL PAAWLKELAG YELVGQVADD LVTEIENTAT VSDAFGAATP AWSTRYPGS