Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2940 |
Symbol | |
ID | 3903755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3471601 |
End bp | 3473919 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637880261 |
Product | protein of unknown function DUF1524 RloF |
Protein accession | YP_482027 |
Protein GI | 86741627 |
COG category | [S] Function unknown |
COG ID | [COG1479] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0973906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGCGA ACGAAACTAC TCTGGGTGAA CTCCTCCAGG GTCAGTGTCA GTACGTCGTC CCGTTGTATC AACGCCCCTA CAGCTGGGAA CGCGCCAACC TGCGGCAACT CTGGGCCGAC ATCACGAGCG TGGCCGCCGC CGGTCCAGCG GCAACACACT TCCTGGGTTC GCTGGTTCTC GCGCCGAGCC CGTCAACCAC GCCGGCCGGA GTGGCGATCT GGCTGGTGGT AGATGGTCAG CAACGGCTGA CGGCGCTGAG CATCCTGCTC TGCGCGATCC GCGATCATGT CCGAGATGAC GATCAGATGC TCGCGGCGAA AATCGACGAT CTGTACCTCA TGAACAGGTA CGCGGCCGGA ACCGAACGTT ACACCCTGTT ACCGACGCGA GCCGACCGGA CCGCCTGGAC CGCTCTCGTC GAGCGGTCGC CGGAGGCAGG AGGCCGGGCG GGGATCGGCG ACGCATACCA GTTCTTCCGC AAGGAACTCG CCGCGTTGCG CGACGCCGAC GACCCGCTGG ACGCAGCACT GATCGAGCAG GCCGTGGTCG GTCAGCTCGC AATCGTGGAG ATCGCCGCGC ATGTCGACGA CGACGTCTAC CGCATCTTCG AATCGCTCAA CCACACCGGC CGCCGGCTCA CCCAGGCGGA CCTGCTGCGC AACTACCTGT TCATGCGGCT ACCCACCCGA GCGGACCGGG TGTACGACTG GCGGTGGTTC CCACTCCAGG AACTGCTCGG TGACAGACTG GAGGATCTGG TCTGGCTCGA CCTCGTGCTC CGCGGCGACG ACCGTGCCAC CAAGGAGACC GTGTACCAGT CGCAGCGGCA GTATCTCCAG ACGCTGCCGG ACGAGGACGC CATCGAGCAG TGGATCTCCG AGCTGCATGC AAAGGCCCTG CTGTTCAGCC GGATCCTCGA TCCGGACCGG GAGGAGGACC CGGTCCTGCG GCAGGCCCTG CACCGGCTGC GCCGGTGGGG GGCGGACGTC GTCCGGCCGA TCGTCCTACA CATGCTGATC GCGCATGCGA ATGACCGTCT CGACGCCACC GAGACCGCCG CGGCACTCCG GGTGGTGGAG AGCTACCTGG TGCGGCGGAT GCTGGTCGGC ATCGCGAGCG CCAACAGCAA CCGCATCCTC ATGTCGCTCG TCAAGGAGCT CGGCGACCAG ACACCGACCG CCGCCGCGGT CACGCGGGTT CTCTCCGGCC CGCGTAAGAA GTTCCCGACC GATCAGCCTG TGAAGGAAGC CGTCCTGCTC AATCCCTTCT ACTGGACCGG ACGCGGCCCT CAGCGCACCT ATGTGTTGCG CAGCCTGGAA GAGGATTACG AGCATCTCGA ACCAGTCGAC TGGGGCGTGA AGCTGACGGT TGAACACATC CTCCCCCAGT CATTGTCGAG ACCGGGATGG AAAGCGGTTC TCGACGCCGA TGCCCACGAG GGTGAGACGC GCGACGAGCT GCACCGCAGG CTCGTCCATA CTCTGGGCAA TCTGACGCTC ACCGCCTATA ATCCGAAACT CGCCGATCAC GAGTTCACCG AGAAGAAGAA GCTGCTGGCC GACAGCGGGC TGGCGATGAA CCGAGAAATC GCCGGTCAGG ACAGATGGGG CCGGGAGGAG ATCCAGAATC GTGGCCGGGC GCTCGCCGAG CGGATCGTGA AGATCTGGCC CGGCCCGGAC GAGTCCGTAG TACCGCCGCC CCAGGACCAG CGATGGACCC TGATGAGCCG GGTACTGGCC GCGATCCCAC CCGGCCGCTG GACCAGTTAC TCCGACGTCG CGGAGGTGAT CGGGTCCCAC GCCGTCGCGG TGGGAGCCAA GCTGGCCAGT GCCCGGATCT CCAACGCCCA CCGCGTCCTG CTCCTGAACG GTTCCGTCTC CCCGGACTTC CGCTGGCCCG ATCCGGAACG CACCGACGAT CCACGGGAGA TCCTGACCGC CGAGGGTGTC ATTCTCAGCA GGTCGGGCCG GGCACTGGCC CGCCAACGCA TGACCGCCGC CGAACTCGCC GCCGCCGCCG ATCTCGAAAC CCCGGAAGAG AGCCAGGGCG CCGCCGGAAC CAAGGAACGT CTGTGGGCCG CCCCGGCCGC CCGGTCCGCC GTGGGGCTCG CGGTCAGCCT GTGGCCATCA GAGCGGCGCG CGGCGGCGCC CACGGACGAT GCGAACTCCG GCCTCTCCTA CCGGGACCGG GTCCGGGGCT GCCTGCTGGG CGGGGCGTTG GGAGACGCGC TCGGTGCGGC AATCGAATTC CAGTCGCTTG ACGAGATCCG ACGGGAGTAC GGGACCAGGG TGACCCGCAA AGTCTGTTTG TGCAGGTAG
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Protein sequence | MKANETTLGE LLQGQCQYVV PLYQRPYSWE RANLRQLWAD ITSVAAAGPA ATHFLGSLVL APSPSTTPAG VAIWLVVDGQ QRLTALSILL CAIRDHVRDD DQMLAAKIDD LYLMNRYAAG TERYTLLPTR ADRTAWTALV ERSPEAGGRA GIGDAYQFFR KELAALRDAD DPLDAALIEQ AVVGQLAIVE IAAHVDDDVY RIFESLNHTG RRLTQADLLR NYLFMRLPTR ADRVYDWRWF PLQELLGDRL EDLVWLDLVL RGDDRATKET VYQSQRQYLQ TLPDEDAIEQ WISELHAKAL LFSRILDPDR EEDPVLRQAL HRLRRWGADV VRPIVLHMLI AHANDRLDAT ETAAALRVVE SYLVRRMLVG IASANSNRIL MSLVKELGDQ TPTAAAVTRV LSGPRKKFPT DQPVKEAVLL NPFYWTGRGP QRTYVLRSLE EDYEHLEPVD WGVKLTVEHI LPQSLSRPGW KAVLDADAHE GETRDELHRR LVHTLGNLTL TAYNPKLADH EFTEKKKLLA DSGLAMNREI AGQDRWGREE IQNRGRALAE RIVKIWPGPD ESVVPPPQDQ RWTLMSRVLA AIPPGRWTSY SDVAEVIGSH AVAVGAKLAS ARISNAHRVL LLNGSVSPDF RWPDPERTDD PREILTAEGV ILSRSGRALA RQRMTAAELA AAADLETPEE SQGAAGTKER LWAAPAARSA VGLAVSLWPS ERRAAAPTDD ANSGLSYRDR VRGCLLGGAL GDALGAAIEF QSLDEIRREY GTRVTRKVCL CR
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