| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2904 |
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| Symbol | |
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| ID | 3903968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3419150 |
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| End bp | 3420511 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880225 |
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| Product | hypothetical protein |
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| Protein accession | YP_481991 |
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| Protein GI | 86741591 |
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| COG category | [S] Function unknown
[T] Signal transduction mechanisms |
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| COG ID | [COG2013] Uncharacterized conserved protein
[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.48904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.788962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGGTCA CCCAGTTCAG TCGAGGGCAG AAGGCGCAGC TGTCGACGAT CACCCCGGGC
ACCGACCTGT ACGTCGGGAT CCAGATCAAT GCGCCGGGGG AGTGGGACAT CTCCTGCTTC
GGCCTGGACG GCGCCGATCG CCTCACCGAC GACCGCTACT TCGTCTTCTT CAACCAGCCG
GCGTCGCCGG AGAAGTCCAT CCAGCTCCTC GGGCCGCAGG CCGGCGACAG TCAGGCGTTC
CGGGTCACCC TCGACCAGGT GCCCGCCTCG ATCGGCCGGC TGTCGTTCTG CGCCGCCCTC
GACGGTGCCG GTAGCGCCTC GGCTATCTCG TCGGGGTACC TGCGGGTCGT CGTCGCGGGA
ACCGAGGTGC TGCGCTACTC CTTCACCGGC GCCGACTTCA CCAGCGAGCG CGCCGTGATG
ATCGCCGACA TCTACCGCAA GGGTGTGTGG CGGATCGCCG CCGTGGGCCA GGGGTTCCAG
GGGGGACTGG CCGAGCTCAT CCGCTCTTAC GGCGGTGAGG TCGCCGACGA GGCGCCGCAG
CCGGCCCCCG CTCCCGGTTT CGGCGCTCCC GGTTTCGGCG CTCCGCTCGC TGCACCGCCG
CCCATGGGCT TCGCGGGTGG GATGCCCGCC ACCGGCATGC CGGGTGGGAT GCCGCCGACC
GGCGCGTTCG GCGGACCCGA GATCCTGCCG TCGCAGGCGC GACCCACCCT GCCCGGGGCG
ATGAACAGCC TGGATCCCTA CCGTGAGGTG CCGACCGCCG GTCGGTGGAC CCAGCAGAAC
GGCAAGCTGG TCAAGGTCAC CCTCGGTCCG GACGCGTTGG CGCTGCGCGG GTCGATGGTC
GCCTACCAGG GCAGCGTCGA GTTCGACTAC AAGAGCAGCG GGCTGCGCGG TCTCATCGAG
GGCAAGCTGA CCGGCCAGAG CCTCAAGCTG ATGACCTGCA AGGGCTCGGG TGAGGTCTTC
CTTGCCCAGG ACGCCGCGGA CCTGCACATC GTCGAGCTCG GCAGCTCCTC CCTCTGCGTC
AACGCGAAGA ACCTGCTGGC GATGGACGCC ACCGTGCGCA CCGAGGTGCG TCGGATCGAG
AGCCCCGGCA TCCCCGGCGG GGGGTTCTTC CACTTCGAGG TCTCCGGGCC GGGTTCGGTG
GTCGTCATGA CCAAGGGGTC TCCGATGACC CTCACCGTGC AGGGCCCGAC CTTCGCGGAC
ATGAACGCCC TCGTCGCCTG GACCACCGGC ATGCGGGTCA GCGTGTCCAC TCAGGTCCGG
ATCTCCCGGC AGATCTACGC CGGCGGTAGC GGCGAGGCAC TGGCTCTGCA GTTCATGGGG
TTCGCGGGGC ACTTCATCGT CGTCCAGCCG TACGAGGTCT GA
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| Protein sequence | MLVTQFSRGQ KAQLSTITPG TDLYVGIQIN APGEWDISCF GLDGADRLTD DRYFVFFNQP
ASPEKSIQLL GPQAGDSQAF RVTLDQVPAS IGRLSFCAAL DGAGSASAIS SGYLRVVVAG
TEVLRYSFTG ADFTSERAVM IADIYRKGVW RIAAVGQGFQ GGLAELIRSY GGEVADEAPQ
PAPAPGFGAP GFGAPLAAPP PMGFAGGMPA TGMPGGMPPT GAFGGPEILP SQARPTLPGA
MNSLDPYREV PTAGRWTQQN GKLVKVTLGP DALALRGSMV AYQGSVEFDY KSSGLRGLIE
GKLTGQSLKL MTCKGSGEVF LAQDAADLHI VELGSSSLCV NAKNLLAMDA TVRTEVRRIE
SPGIPGGGFF HFEVSGPGSV VVMTKGSPMT LTVQGPTFAD MNALVAWTTG MRVSVSTQVR
ISRQIYAGGS GEALALQFMG FAGHFIVVQP YEV
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