| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2900 |
|---|
| Symbol | |
|---|
| ID | 3903964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3414536 |
|---|
| End bp | 3415465 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637880221 |
|---|
| Product | putative integral membrane protein |
|---|
| Protein accession | YP_481987 |
|---|
| Protein GI | 86741587 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.285331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCTCT TCATCCCGCT GGCCCTGTGC GCCGCGTTCC TGCTCGCGTC GTCCGCGGCT
CTGCAACAAC GCGCCGCCGG ACGCAGCCGG TTCGCCGCCC GTGACGACCG GACGCACGCG
CTGCCCGGAA TGGGGCATCT GGTCGACCTG GCACGCGAAC CGATGTGGCT GCTGGGCTGG
CTGACAAACG TCGCCGGGTT CTTCACCCAG GCGCTCGCCC TACACCTTGG TTCCCTCGCC
GAGGTGCAGC CCCTCATGGT CACCCAGTTA CTGTTCGCGC TCCCGCTGGG CCTGGTCCGC
ACCCATCTAC GGATGGCGCG GGGAGCATGG TGGGCGGTGG CATCGATCTG CGCAGGCCTC
GCGCTGCTCC TCACGGTCCA GGGACGCCTA CCCGCCCATG CTCCCCTGGA CGAATACCGG
CTGGCGCTGA CCATCCTCGC GATCATTGCC CTCGCGGCGA CGCTGACGGT CTTCTCCCGC
GGCCGGCGAC CAGCAATGCG TGCGGCGATG CTCGGAGTCG GCGCCGGGCT GTTCTTCGCG
CTGAGCGCCC TGCTGATGAA GCAGGCCACC GACGAGACCC TGAACGAGGG GATCGCTACC
ACCGCGACCC ACTGGTTCGC CTACGCCCTG TGCGGAGTCA CGATGGCCAG CCTCGTATTC
GGGCAGATGG CGTTCGCCGT GGGTCCGCTC GCGCCGACCG TCACCGCCAT GAACATCACC
AATCCGACGG TCTCCTACAC TCTCGCCGTG CTCGTCTTCG GGGTACCCGC CCCGGACACC
CCCGGGGTTA TCACGGGTGT CACGGTGGCG GCTCTGCTGG TCGTGGGCGG GGTCGTCCTG
CTCGCCCGCT CGCCCGCCCT GCCACGCCCC ACCCGTCGCC TGCCTGACGT CTCTCGCCAC
GATGCCCCCG CCCCGATGCC CCCCTCCTGA
|
|---|
| Protein sequence | MLLFIPLALC AAFLLASSAA LQQRAAGRSR FAARDDRTHA LPGMGHLVDL AREPMWLLGW
LTNVAGFFTQ ALALHLGSLA EVQPLMVTQL LFALPLGLVR THLRMARGAW WAVASICAGL
ALLLTVQGRL PAHAPLDEYR LALTILAIIA LAATLTVFSR GRRPAMRAAM LGVGAGLFFA
LSALLMKQAT DETLNEGIAT TATHWFAYAL CGVTMASLVF GQMAFAVGPL APTVTAMNIT
NPTVSYTLAV LVFGVPAPDT PGVITGVTVA ALLVVGGVVL LARSPALPRP TRRLPDVSRH
DAPAPMPPS
|
|---|
| |