Gene Francci3_2897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2897 
Symbol 
ID3903961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3412005 
End bp3412319 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content62% 
IMG OID637880218 
Productsmall multidrug resistance protein 
Protein accessionYP_481984 
Protein GI86741584 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.904986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTTTA TCGTCGCTAT AGTGCTGGAG ATCACTGGAA CGCTGGCGCT CCGGGAGACC 
AGCGGGTTCA CTCGGCTCTG GCCGACCCTG ATGGTCTGTG TCTGCTATCC GCTGTCATTT
TTTTTCGTGT CTCGAGTGTT GCAGCATCTG GAGATCGGCT TCACTTACGC GGTGTGGTCC
GCGGCCGGCA CCGCGGCCAT GGCCGTCATT GGCGCGGCCG TCTTCGGCGA ATCGATGAAC
GCGCTAAAGG TCGCCTCGCT GGTCCTCGTC ATCGTCGGAG TGGTCGGTCT CCAGCTTAGC
GGTGCCCGCC GCTGA
 
Protein sequence
MQFIVAIVLE ITGTLALRET SGFTRLWPTL MVCVCYPLSF FFVSRVLQHL EIGFTYAVWS 
AAGTAAMAVI GAAVFGESMN ALKVASLVLV IVGVVGLQLS GARR