Gene Francci3_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2893 
Symbol 
ID3906024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3407423 
End bp3408229 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID637880214 
Producthypothetical protein 
Protein accessionYP_481980 
Protein GI86741580 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.721107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTTG CCGCAGACCG CTGGATGACC GAGTACCCCG CCTGGCTTCC CGCAGCAGAT 
GGGGTACGCC GCGTATTTGC GTTGCCTGGC GGCCCGGTCT TGGCGGAGGT TCACGGCGGC
AAATTGACGC TCGCGGCACT GGGCGATGAG GCGGCGGAGC CGCTGGCGGA TGTCTTCGGC
TTGCCGGAGG GAGCAGCTAG CGAAGTGCCG GAGCTCGCCA AGGAGCTGGC TGGCCTCGGG
CTGGTGGGAC GTTTCCGCAA CCCCTCGCTG TGGGAGGCCC TAGCGACCGC GATCTTGCGT
CAAGTCATCC GGGCGGGGCA ATCCAAGAAG CTCTACCGGG CACTATGTGC GGCCCACGGC
GAGCAAGTGG CGCTGCCGGA CGGTGGCGCG TTCGGCCTGT TTCCGAGCCC CGAAAAAATC
CTAGAGCTAG ACGACGAGCA GTACGGAGAA CTAGGGCTAG CTTTCAAGCG GCCAGCGCTG
CGGGCCGCCG CTACGGCCTA CCTGGCCCAC GGCGAAAACT GGAACCGCCT ACCCCTGGCT
GCCCTGGTCG ACGAATTGCA AAGCGTCCAG CGGATTGGCC CTTGGACGGC CGGCGCTGCT
GTTGCTGACT ACACCAATAC CTGGGACCTC TACCCCTACG CCGATCTGGC CGTACGCACG
TGGGCGGGGC GAGCTGCCCC AGCGCACCAT TGGTTCAACA ATGAGCGTGC CTTCGGTGCC
CAGTGGCGGC ATCTGGCGGG GGAACACCTA TCAACCTTGA CCATACTGAC CCTCGCTTGG
GGTTCATACC GTGGAGACAT TGGATGA
 
Protein sequence
MPFAADRWMT EYPAWLPAAD GVRRVFALPG GPVLAEVHGG KLTLAALGDE AAEPLADVFG 
LPEGAASEVP ELAKELAGLG LVGRFRNPSL WEALATAILR QVIRAGQSKK LYRALCAAHG
EQVALPDGGA FGLFPSPEKI LELDDEQYGE LGLAFKRPAL RAAATAYLAH GENWNRLPLA
ALVDELQSVQ RIGPWTAGAA VADYTNTWDL YPYADLAVRT WAGRAAPAHH WFNNERAFGA
QWRHLAGEHL STLTILTLAW GSYRGDIG