Gene Francci3_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2889 
Symbol 
ID3906020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3404367 
End bp3405800 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content70% 
IMG OID637880210 
Productputative DNA-binding protein 
Protein accessionYP_481976 
Protein GI86741576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0241549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.497135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGGG CATCAGGCCG GTACTGCCGC TCCTGCGGGA GCCGTCTCGC CCGCGACAAC 
GCGGCCGGGT CCTGTGCCCC CTGCCAGCGC AAACAGGAGC AGCTGCGCCT TCAGGCCCCG
GTGGTGCCTG ATCACTTCTG GCAGACCGAT GAACTACGCG ACGCCCTGGC CAGCTGGCAC
ATGGGCCGGG TGATCGCCGC CTACCGCCGC AACCCCTGGC ACGGCCGGGT GCTGGCGCAG
GAACTGGTTG GCGGCTGGGC CGACCTCTCC CAGGTGCAGC TATCCCGCAT CGAGTCCGGC
CCGCCGATCA AGGACCTGGA CCGGCTGATG ATGTGGGCGC GCACCTTGCG CATCCCCGCT
CATCTGCTGT GGTTCCAGCT CCCCGAGCAG CGCCCCGCAC CTGTAGCGGC GGCCCCGACG
CCGCCGGTAC CCGCGGGGCC GGACCTGCCG GCGCTGCTGG GCAGCCTGAC GGCTGGGCGC
CTCCCGTTGG CCGCCGGCGA GACCCGTAGC CCCACCATCG GCATTTCCGC CTTCGAGGGC
ATGACTACGG GCCAGAGCGC CGAACTGCTG CTGCAATTGT TCTTGCAGCT TGACGACGAG
TTGGGCGGCG ACAGCCTGTA TCTGCCCCTA TCCCGGTACG TGGCCCGGAT GGCCGTGACG
GTGGAGCAGG ACCCCGGTGA TGGTTTGCTC GCTTTCGGCC AGCTCGCCCA GATGACGGGG
TGGCTGGCGC TGGACGCTGA CCACCACGCC CAGGCCCGCC GCTACTTCAC CACCACCATC
TACGTGGCCC ATGAGAGCGA CGAACCGGGC CTGGCCGCCA GCGCCCTGGG TTATATGAGC
CTTCAGGAGA CCTACCGGGG GCGGCGGGGG CCGGCGCTGT CGCTAGCGCA AACCGCGCTC
GCCTCCGGGA CGGCCGGGCT TACGCCGCTG ACCAAGACGA TGTTGGGTAC CCGCCTGGCT
CGGGCCCAGG CCGGCGTTGG CGACCAGGAC GGCTGCCGCC GCACCTTGGA TGCCGCCCGT
ACCGACTTCG AGGCCGCCGG CCACCGGGAC GAGCCCATGT GGGTGTCCTA CGTCGACGAG
GTAGAGGTAG CCGCCCAGGA AGGCGCCTGC CTGCTGGAAC TGGGCCAAAC CGGCGAGGCC
GCCTCGGCGC TGACGCAGGC CATTGGCCTG CTTACCCAGC GCACACCCCA CCGCATCCGG
GACCAGGTGC ATTACCTGTC CCGGCTGGCG AAGTGCCACT TGAAGGCGGG CGACGTTGAG
CAGGCCTGCC AGACGGCGGC CGATGCCCTC TCCCTGAGCG AAGCCATCGG CTCGACGCGG
GTAGCTCTGC GCCTGAAAGA ATTTGCGGAC GGGCTTGAGC CCTTCGGCAC CGTGCCCGCG
GCGCGGGACT TCGGCGAGCG GTTCCGCCTG GCGACCGCTG GCCCCGGCAG TTAG
 
Protein sequence
MDRASGRYCR SCGSRLARDN AAGSCAPCQR KQEQLRLQAP VVPDHFWQTD ELRDALASWH 
MGRVIAAYRR NPWHGRVLAQ ELVGGWADLS QVQLSRIESG PPIKDLDRLM MWARTLRIPA
HLLWFQLPEQ RPAPVAAAPT PPVPAGPDLP ALLGSLTAGR LPLAAGETRS PTIGISAFEG
MTTGQSAELL LQLFLQLDDE LGGDSLYLPL SRYVARMAVT VEQDPGDGLL AFGQLAQMTG
WLALDADHHA QARRYFTTTI YVAHESDEPG LAASALGYMS LQETYRGRRG PALSLAQTAL
ASGTAGLTPL TKTMLGTRLA RAQAGVGDQD GCRRTLDAAR TDFEAAGHRD EPMWVSYVDE
VEVAAQEGAC LLELGQTGEA ASALTQAIGL LTQRTPHRIR DQVHYLSRLA KCHLKAGDVE
QACQTAADAL SLSEAIGSTR VALRLKEFAD GLEPFGTVPA ARDFGERFRL ATAGPGS