Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2886 |
Symbol | |
ID | 3906017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3402173 |
End bp | 3402781 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880207 |
Product | putative regulatory protein |
Protein accession | YP_481973 |
Protein GI | 86741573 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000113276 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.634194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCAGA GTCACCTAGC CTTGGAGGAT GACCGTCCCC GCGACGCCGT CCGGCTGGCC GAGGCTGGCC TTGCCCTGGT GCCGGATGAT CCGGGCTGCG GCGCATTGCG TACCCGGCTT CATGCCATGA AGGCCAGGGG CAGCGCCTTG GCCGGAGCAC CGGCCGACTG CTTGACCGCC CTCCGGGCCT CCGTACTGGA ACTGTCACGT GCCGCCACCG GTGGCCACGA GTGGCTGAGC CCATTCGACG AAGCAGCGCT GGCCGCTGAG GCCGCCATTT GCTTGCGGGA TCTTCGTGAC CTTGCCGGAG CCGAGCGCCA GGTTGCCCGC GTGCTGGAGC TTCGAGGCCC CGACCGGGTT CGTAGCCGGG CCTTCGGGAA CCTGACCTTG GCCACGGTGC GTCTTGGGGC CGGCGACCTT GAGGGGGCGT GTGAAGCCGG CGGCCAGGTG CTCGACGTGA CGCCGCATCT GGCATCCGAT CGCGTCGTCG GCCAGCTTCG GGCCCTTGGC CACCGGCTTG AACCTCACGG AGCTGTTGGG CCCGTAGCCA ATTTTCTTGG GCGGATGACC ACGACGTTGC CACGACCCCG GCCGGCTGAG GCTTCATGA
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Protein sequence | MSQSHLALED DRPRDAVRLA EAGLALVPDD PGCGALRTRL HAMKARGSAL AGAPADCLTA LRASVLELSR AATGGHEWLS PFDEAALAAE AAICLRDLRD LAGAERQVAR VLELRGPDRV RSRAFGNLTL ATVRLGAGDL EGACEAGGQV LDVTPHLASD RVVGQLRALG HRLEPHGAVG PVANFLGRMT TTLPRPRPAE AS
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