Gene Francci3_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2885 
Symbol 
ID3906016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3401649 
End bp3402176 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content68% 
IMG OID637880206 
ProductNUDIX hydrolase 
Protein accessionYP_481972 
Protein GI86741572 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000755007 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.649673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG AACAGGAGTG GGAGGCCAGC TACGCCGGCC GCGATGCCGC CGAGTTCGCC 
CACCTGGCCG AAGGCAACGC CCGCCAGGCC CGCAAGCGGG TATCGGCTGA TGCTCTGATC
CGCGACGAAG CCGGCCGCCT CCTGCTGGTT GATCCGACAT ACAAGCCGGA TTGGGATCTA
CCGGGCGGGA TGGCTGAAGC CAACGAGCCG CCGCGGGACG CCCTGCGGCG CGAGCTGAAG
GAAGAACTCG GTCTTGATCC GCAGGTGGGT GACCTGCTGT GCGTGGACTG GGTTTCACCG
CATGGGCCGT GGGATGACCT GCTGGCCTTC GTCTTCGACG GCGGCGCCCT CACCCAGCAG
CAAGCGCAGG GGCTGCGCTC CGTGGACCCG GAGCTGGCGG CCGTCCGCTT CTGCTCCCCG
GAGGAGGCGG CCCAGCTACT CCGGCCGTAT GTATGGCGGC GGGTACACGT AGCACTCGCC
GTGCTGGGCG GAGGAGGTGT CCGCTACCTC CAGGACGGCC ATAGTTGA
 
Protein sequence
MNIEQEWEAS YAGRDAAEFA HLAEGNARQA RKRVSADALI RDEAGRLLLV DPTYKPDWDL 
PGGMAEANEP PRDALRRELK EELGLDPQVG DLLCVDWVSP HGPWDDLLAF VFDGGALTQQ
QAQGLRSVDP ELAAVRFCSP EEAAQLLRPY VWRRVHVALA VLGGGGVRYL QDGHS