Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2885 |
Symbol | |
ID | 3906016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3401649 |
End bp | 3402176 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637880206 |
Product | NUDIX hydrolase |
Protein accession | YP_481972 |
Protein GI | 86741572 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000755007 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.649673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCG AACAGGAGTG GGAGGCCAGC TACGCCGGCC GCGATGCCGC CGAGTTCGCC CACCTGGCCG AAGGCAACGC CCGCCAGGCC CGCAAGCGGG TATCGGCTGA TGCTCTGATC CGCGACGAAG CCGGCCGCCT CCTGCTGGTT GATCCGACAT ACAAGCCGGA TTGGGATCTA CCGGGCGGGA TGGCTGAAGC CAACGAGCCG CCGCGGGACG CCCTGCGGCG CGAGCTGAAG GAAGAACTCG GTCTTGATCC GCAGGTGGGT GACCTGCTGT GCGTGGACTG GGTTTCACCG CATGGGCCGT GGGATGACCT GCTGGCCTTC GTCTTCGACG GCGGCGCCCT CACCCAGCAG CAAGCGCAGG GGCTGCGCTC CGTGGACCCG GAGCTGGCGG CCGTCCGCTT CTGCTCCCCG GAGGAGGCGG CCCAGCTACT CCGGCCGTAT GTATGGCGGC GGGTACACGT AGCACTCGCC GTGCTGGGCG GAGGAGGTGT CCGCTACCTC CAGGACGGCC ATAGTTGA
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Protein sequence | MNIEQEWEAS YAGRDAAEFA HLAEGNARQA RKRVSADALI RDEAGRLLLV DPTYKPDWDL PGGMAEANEP PRDALRRELK EELGLDPQVG DLLCVDWVSP HGPWDDLLAF VFDGGALTQQ QAQGLRSVDP ELAAVRFCSP EEAAQLLRPY VWRRVHVALA VLGGGGVRYL QDGHS
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