| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2866 |
|---|
| Symbol | |
|---|
| ID | 3905997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3379052 |
|---|
| End bp | 3380041 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637880187 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_481953 |
|---|
| Protein GI | 86741553 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.219006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAC CCACCTGGTC CCGGGGCTTT CCCTACCAGG TCAGCGGGAG ACCGGCTCCG
GCGTCCTCGA CGGCGCGGAG GTCTTCGAGC CGGCCACGGA GACATTCTCG TTCGGGTCCG
TCGCAAACCC GAACCGGCTC CGGCTCGGCG CCTCCCGGTC ACTGTGACTT CTGGAGGTCG
GCCGCCGTCG GGCGGCCGGC CTTGCTGTTT CACCGTCGGC TTCACCGCTG GCGGGTCTGT
CGGCCACGAG GAGCGTCGTC CTACCGTCAC AGCATGAGCA GCCGCGACGT GACCGCCCCC
TCGGTCACCA CACCCCCGGT GACCACACCC CCGGTTTCGG CGGACCCGTT CGGCCGGGAG
AACCACCGGT CGTTCTGGGC CCAGCTGGAC GGGCCGGTGC ACTACGTCGA CCTCGGGGGG
GCCACCCGAC GGCCCGCTGC TGCTGTGCGC GCACGGTCTC GGCGGCTCCC ACCTCCCCTG
GCTCGCCTTC GCCCCACTGC TCACCCCGGT CTGCCGGTCC CCCGCCTCGC CGCGGCGGTC
CTCGCGTACC GCCGCGGCCG CTACACCCCC CACCAGCTCG TCGACGAGAA CCTGCGGCGG
CTCTGCGCCG ACCCCGGCCG CGTCCCGCCG GCGGCGATCG CGGCGATGGT GCGCGCGCAG
AGCGAGCGCG GCGGGATCCC CGGCGCGGAC CAGGCGTACG TGGGAGCGGC GCGCTCGGTC
GTCTGGTCAC TGGTGCGCCC GGCCTCGCTC GCGCACATGG TCCGCACCGT CCGGCAACCG
ACGCTGCTCG TCCACGGCTC CGCCGACCGG CTGATCCCGG TGGGCGTGGC ACGCCATGTC
GCCGCGGAAC GCCCGGACTG GCGGGTGGAG ATCCTCGACA GGTTCGGCCA CATGCCGATG
CTTGAGGCGA AGGCTCACCG CCGAGCTGGT GCTGGACTGG CTGGGCCGGG AGGCGGCGCA
CGCCCGGCGG CGGCGGTGGC GGCCGACTGA
|
|---|
| Protein sequence | MRRPTWSRGF PYQVSGRPAP ASSTARRSSS RPRRHSRSGP SQTRTGSGSA PPGHCDFWRS
AAVGRPALLF HRRLHRWRVC RPRGASSYRH SMSSRDVTAP SVTTPPVTTP PVSADPFGRE
NHRSFWAQLD GPVHYVDLGG ATRRPAAAVR ARSRRLPPPL ARLRPTAHPG LPVPRLAAAV
LAYRRGRYTP HQLVDENLRR LCADPGRVPP AAIAAMVRAQ SERGGIPGAD QAYVGAARSV
VWSLVRPASL AHMVRTVRQP TLLVHGSADR LIPVGVARHV AAERPDWRVE ILDRFGHMPM
LEAKAHRRAG AGLAGPGGGA RPAAAVAAD
|
|---|
| |