| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2827 |
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| Symbol | |
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| ID | 3904739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3328854 |
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| End bp | 3330230 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637880148 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_481914 |
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| Protein GI | 86741514 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.11004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.674457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCACG GGTTTCGAAG CACGGTCGCG GGCCTTGCGC TTCTCTCCGC GGTCGTGCTG
GCCGCCTGTG GTAGCGGTGG CAAAGCCGAG CCGGCCCGAG TTTCCGGCGA GGTCAAGATC
GGACTGCTCG CCCCCATGAC CCATGGCGAT ACCGAGACGG GGCGTGACGC ACAACGCGGA
GCAGAGCTCG CCAGCCGTCT CATCAACGCC GGCGAAAGCT GGGCGAGCGA CGGGACCAGA
GACCTCTGGG GGCCAGCCGG CCGGGCCCAC CTTTCTGTTG TGACATTGGA TACAAGTAGC
GATCCGCGCC AGACCGCGGA CGCCACGTCA CGCTTGGCGA CCGACCACGG CGTCGTGGGC
ATCGTCGGCG CGTTCACCCC CGACGCCACC CTGGAAGCCA GCCAGCGGGC CGAACGCCTG
CGGATCCCGT TCGTCAGCGG GGGCCCGTCG CTGACGGCGC TGACCGAACG TGGGCTGAGC
TGGTTCTTCC GGATCGGACC CGACGCGGCC GACTACGGCG GCGCCTTCCT GTCCCTGCTG
CGTGACGCCG AGCAGCCGGG CCAGGAACGC CGACGCGTCG CCCTGCTCTA CACCAACGAC
GCCACCGGCC TCGATATGCA GGCGACCGTG GCGGAGTTCG CCGAGGAGAC CGGTTACCCG
ATCGTGGCGA GCGTGGCCTA CCAGCCGGGT ACGGGCCAGC CGGGTACGGG CGATCTGGCC
GCCGCTGTCG GCGCCCTGCA AGCCACTGCA CCCGACATTG TACTGACGAA TATTTCTCCC
GGTCAGGGCG CAATTCTGGG AAACACTTTC CGGGATGGTG GATACATACC GCCCGCGGTT
GTCGTGTACG GCGACCCGGC GGAGGCCGCC CGACTCGCCG CGGTTCCCGA GTTCGCCGAT
CGGGTCAGCC GCCAGGTCGC CTGGTCGATG CCCATCGCCC GGGCCAATCC GCTGGCCGCG
AGAGTAATCG ACCGCTATCT GCACGATTTC GGGGCGCCGA TGACCGAGAA TGCGGCCGAG
GCCTTCACCG CCATGACCAC GATCGCGCAG GCAATCGATG ACGCGGGCAG TACGGATCGT
GAACTGGTCC GCTCCGCGTT GACCGCCCTG AATCTACCCG CGAGTTCGAC CATCATGCCG
TGGAACGGCG TCCATTTCGA CGGAACCCAC CAGAACACAC TTTCCGCAAC AGCGATCGAA
CAGACCACCG GTACGACATT CAGAACCGTC TACCCCCGCG ACCTGGCCAC GACGACGGTC
AAGTGGCCCG CGCCGGGGAC GGCCGTGACG ACTGTCGGAC ACCCATCATC GAGGGCGACG
TCGGCGTCAC AGTCGACGCC GGGGACCAGG ACCAGGACAC GGACACGGAA CGAGTAG
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| Protein sequence | MIHGFRSTVA GLALLSAVVL AACGSGGKAE PARVSGEVKI GLLAPMTHGD TETGRDAQRG
AELASRLINA GESWASDGTR DLWGPAGRAH LSVVTLDTSS DPRQTADATS RLATDHGVVG
IVGAFTPDAT LEASQRAERL RIPFVSGGPS LTALTERGLS WFFRIGPDAA DYGGAFLSLL
RDAEQPGQER RRVALLYTND ATGLDMQATV AEFAEETGYP IVASVAYQPG TGQPGTGDLA
AAVGALQATA PDIVLTNISP GQGAILGNTF RDGGYIPPAV VVYGDPAEAA RLAAVPEFAD
RVSRQVAWSM PIARANPLAA RVIDRYLHDF GAPMTENAAE AFTAMTTIAQ AIDDAGSTDR
ELVRSALTAL NLPASSTIMP WNGVHFDGTH QNTLSATAIE QTTGTTFRTV YPRDLATTTV
KWPAPGTAVT TVGHPSSRAT SASQSTPGTR TRTRTRNE
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