Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2823 |
Symbol | |
ID | 3904735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3323450 |
End bp | 3324379 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880144 |
Product | L-proline dehydrogenase |
Protein accession | YP_481910 |
Protein GI | 86741510 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCAAA AGCTGATGCC TCCCGTGTCC CGCCATCCGC TCACCCGCGC GCTCGTCACA CGTACCCCCC TCGCCCGGGG GATCATCGAT CGCTTCGTCG CCGGCCCGTC CGATACGGAC GCGATCGCCG CGGTAGCCGG ACTTGCCGAC CTCGGCCTCC TGGCGACAGT GGATCTGCTC GGTGAGGACA TCACCCGTGC GCAGGACGCG GCCGACACTC TGCTGGCCTA CCTCGGGCTG CTCGACCTCG CCGACCGCGC GGGGATCGCC GCCGGTCTCG ACGTCTCGGT GAAGCTGTCC GCGCTCGGTC AGGCCGTGCC CCGCGACGGC CGCAAGCTGT CATACGAGAA CGCCGCCGAG CTCTGCGCGC GGGCAGCGGC GGCGAACGCG ACGGTCACCC TGGACATGGA GGATCACACC ACCACGGACT CGACGTTGGA CACCCTGGTG GAGCTGCGTC GCGACTTCCC CTTCGTCGGC GCCGTCCTGC AGGCGCAGCT TCTGCGCACC GAGACGGACT GCCGTGACCT CGCCACCGCC GGGTCACGGG TGCGGCTGTG CAAGGGCGCC TACCGCGAAC CGTCCGCCGT GGCCTACCAG GGACGTCCGG CCGTCGCCGC CGCGTACGCC CGCTGTCTGG GAATCCTGCT CACCGGATCG GGCTATCCCA TGATTGCCAC TCACGATCCC GCCCTCCTGA ACCTCGCCGG CCGGTTCGCC GAGCACGTGG GACGCCTGCC CGCGACCTTC GAATACCAGT TGCTGTACGG GGTACGCCCG GGCGAGCAGC GGCGGTTGGC GTCGACCGGG GCCACGGTGC GGGTGTATGT GCCCTACGGG GCGGACTGCG TGCCGTACCT GACCCGGCGG CTGGTGGAGA GACCCACGAA CCTGCTGCTT GCCGCCCGCG CGCTCCGGAG TCGGGCCTGA
|
Protein sequence | MIQKLMPPVS RHPLTRALVT RTPLARGIID RFVAGPSDTD AIAAVAGLAD LGLLATVDLL GEDITRAQDA ADTLLAYLGL LDLADRAGIA AGLDVSVKLS ALGQAVPRDG RKLSYENAAE LCARAAAANA TVTLDMEDHT TTDSTLDTLV ELRRDFPFVG AVLQAQLLRT ETDCRDLATA GSRVRLCKGA YREPSAVAYQ GRPAVAAAYA RCLGILLTGS GYPMIATHDP ALLNLAGRFA EHVGRLPATF EYQLLYGVRP GEQRRLASTG ATVRVYVPYG ADCVPYLTRR LVERPTNLLL AARALRSRA
|
| |